RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ADAP00813 363 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 URODP06132 367 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 KLRC2P26717 231 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ABCD3P28288 659 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 SLC16A2P36021 539 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 TSPAN7P41732 249 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 PTPN9P43378 593 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 BLKP51451 505 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 CDH15P55291 814 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 RPP30P78346 268 aaKnown RBP3.59□□□□□ -1.83
SRP54-209ENST00000555746 PTP4A2Q12974 167 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 SRSF7Q16629 238 aaKnown RBP eCLIP3.59□□□□□ -1.83
SRP54-209ENST00000555746 SMTNL2Q2TAL5 461 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 Q4G0T1 1027 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ALG10Q5BKT4 473 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 MTX3Q5HYI7 312 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ALG10BQ5I7T1 473 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ENTPD8Q5MY95 495 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ZNF626Q68DY1 528 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 DPY19L2P1Q6NXN4 242 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 SLC2A7Q6PXP3 512 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 H1FNTQ75WM6 255 aaPredicted RBP3.59□□□□□ -1.83
SRP54-209ENST00000555746 CCDC25Q86WR0 208 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ANKRD13BQ86YJ7 626 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ARMC8Q8IUR7 673 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 CPXM2Q8N436 756 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 SLC25A41Q8N5S1 370 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 KDM1BQ8NB78 822 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 PRSS3P2Q8NHM4 247 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 C16orf52Q8NHV5 167 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 MPLKIPQ8TAP9 179 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 NOC3LQ8WTT2 800 aaKnown RBP3.59□□□□□ -1.83
SRP54-209ENST00000555746 TMEM170AQ8WVE7 144 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 HSPH1Q92598 858 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ZUFSPQ96AP4 578 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 EME1Q96AY2 570 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 MSI2Q96DH6 328 aaKnown RBP3.59□□□□□ -1.83
SRP54-209ENST00000555746 TMEM79Q9BSE2 394 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 PNRC2Q9NPJ4 139 aaKnown RBP3.59□□□□□ -1.83
SRP54-209ENST00000555746 ENTPD7Q9NQZ7 604 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 NLKQ9UBE8 527 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 CNPY2Q9Y2B0 182 aa3.59□□□□□ -1.83
SRP54-209ENST00000555746 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.59□□□□□ -1.83
SRP54-209ENST00000555746 ZNF644Q9H582 1327 aaPredicted RBP3.59□□□□□ -1.83
SRP54-209ENST00000555746 NRXN1Q9ULB1 1477 aa3.59□□□□□ -1.84
SRP54-209ENST00000555746 LAMA3Q16787 3333 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 CACNA1IQ9P0X4 2223 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 TARSL2A2RTX5 802 aaKnown RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 ADAM10O14672 748 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 TNPO2O14787 897 aaKnown RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 TSPAN4O14817 238 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 RNMTO43148 476 aaKnown RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 ATG13O75143 517 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 TMCC1O94876 653 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 MBD4O95243 580 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 CD4P01730 458 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 FGBP02675 491 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 UNGP13051 313 aaPredicted RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 ATP1A3P13637 1013 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 KRT9P35527 623 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 ARL1P40616 181 aaPredicted RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 CLCNKBP51801 687 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 CASP6P55212 293 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 MTX1Q13505 466 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 SLC4A8Q2Y0W8 1093 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 FBXO43Q4G163 708 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 SYTL3Q4VX76 610 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 C6orf10Q5SRN2 563 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 UBAP2Q5T6F2 1119 aaKnown RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 IL20RBQ6UXL0 311 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 PRSS45Q7RTY3 260 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 TRIM74Q86UV6 250 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 TRIM73Q86UV7 250 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.58□□□□□ -1.84
SRP54-209ENST00000555746 ZDHHC23Q8IYP9 409 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 GHDCQ8N2G8 530 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 PPHLN1Q8NEY8 458 aaKnown RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 ZMIZ2Q8NF64 920 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 OR4N2Q8NGD1 307 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 NFKBIDQ8NI38 313 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 SECISBP2LQ93073 1101 aaKnown RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 TRMOQ9BU70 441 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 CXorf56Q9H5V9 222 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 TUBA8Q9NY65 449 aaPredicted RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 MSRB1Q9NZV6 116 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 PCDHA12Q9UN75 941 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 SLC4A4Q9Y6R1 1079 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 KIAA0232Q92628 1395 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 COL3A1P02461 1466 aaPredicted RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 CCDC18Q5T9S5 1454 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 LAMA2P24043 3122 aaKnown RBP3.58□□□□□ -1.84
SRP54-209ENST00000555746 CDC42BPGQ6DT37 1551 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 LRRC37A3O60309 1634 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 BRCA2P51587 3418 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 KIAA1551Q9HCM1 1747 aa3.58□□□□□ -1.84
SRP54-209ENST00000555746 A0A1W2PQM1 296 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 C17orf102A2RUQ5 167 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 GAGE12JA6NER3 117 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 FAM157AC9JC47 383 aa3.57□□□□□ -1.84
SRP54-209ENST00000555746 F5H0A9 414 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms