RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 AGPSO00116 658 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 TRAFD1O14545 582 aaPredicted RBP10.29□□□□□ -0.76
SRP54-208ENST00000555557 TIMM44O43615 452 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 NDST3O95803 873 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 GSRP00390 522 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 IL12RB1P42701 662 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 WASP42768 502 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 CBLBQ13191 982 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 EIF4HQ15056 248 aaKnown RBP10.29□□□□□ -0.76
SRP54-208ENST00000555557 MICALCLQ6ZW33 695 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 GRIN3AQ8TCU5 1115 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 BLOC1S5Q8TDH9 187 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 LRRC39Q96DD0 335 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 MFSD3Q96ES6 412 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 TTC25Q96NG3 672 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 FCRL3Q96P31 734 aaPredicted RBP10.29□□□□□ -0.76
SRP54-208ENST00000555557 IL22Q9GZX6 179 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 CACNA2D2Q9NY47 1150 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 OGFRQ9NZT2 677 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 SAMD15Q9P1V8 674 aa10.29□□□□□ -0.76
SRP54-208ENST00000555557 LOC730098B7Z3J9 87 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 BUD23O43709 281 aaKnown RBP10.28□□□□□ -0.76
SRP54-208ENST00000555557 FZD6O60353 706 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 POP4O95707 220 aaKnown RBP10.28□□□□□ -0.76
SRP54-208ENST00000555557 EPOP01588 193 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 UGT2B4P06133 528 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 CTSLP07711 333 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 HLA-DPA1P20036 260 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 CD72P21854 359 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 PRKCHP24723 683 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 NMBRP28336 390 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 RECQLP46063 649 aaPredicted RBP10.28□□□□□ -0.76
SRP54-208ENST00000555557 GABPB1Q06547 395 aaPredicted RBP10.28□□□□□ -0.76
SRP54-208ENST00000555557 SEPT6Q14141 434 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 EFTUD2Q15029 972 aaKnown RBP eCLIP10.28□□□□□ -0.767e-8■□□□□ 11.2
SRP54-208ENST00000555557 SLC14A2Q15849 920 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 POM121L1PQ3SYA9 428 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 ARSIQ5FYB1 569 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 RALGPS1Q5JS13 557 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 SPDYCQ5MJ68 293 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 TRMT10BQ6PF06 316 aaKnown RBP10.28□□□□□ -0.76
SRP54-208ENST00000555557 SERPINA13PQ6UXR4 307 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 ZSWIM9Q86XI8 627 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 PAF1Q8N7H5 531 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 FBF1Q8TES7 1133 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 UCMAQ8WVF2 138 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 MRRFQ96E11 262 aaKnown RBP10.28□□□□□ -0.76
SRP54-208ENST00000555557 TMEM245Q9H330 911 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 ATP13A3Q9H7F0 1226 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 TRPV5Q9NQA5 729 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 THAP10Q9P2Z0 257 aaPredicted RBP10.28□□□□□ -0.76
SRP54-208ENST00000555557 SLC8A2Q9UPR5 921 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
SRP54-208ENST00000555557 KCTD3Q9Y597 815 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 SPO11Q9Y5K1 396 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 RPS6KL1Q9Y6S9 549 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 TICRRQ7Z2Z1 1910 aa10.28□□□□□ -0.76
SRP54-208ENST00000555557 MIA3Q5JRA6 1907 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.27□□□□□ -0.76
SRP54-208ENST00000555557 TCRBV9S1A1TA0A576 114 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 SMIM23A6NLE4 172 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 ANKRD66B4E2M5 251 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 AP3B1O00203 1094 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 AURKAO14965 403 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 HTRA2O43464 458 aaPredicted RBP10.27□□□□□ -0.76
SRP54-208ENST00000555557 LEFTY1O75610 366 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 PGLSO95336 258 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 EGFP01133 1207 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 FGF1P05230 155 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 NUDT17P0C025 328 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 CTPS1P17812 591 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 PGAM1P18669 254 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 TIE1P35590 1138 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 ABL2P42684 1182 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 MAPK8P45983 427 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 SLCO1A2P46721 670 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 VASPP50552 380 aaPredicted RBP10.27□□□□□ -0.76
SRP54-208ENST00000555557 EPHB1P54762 984 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 SEMG2Q02383 582 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 ZNF844Q08AG5 666 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 IFFO1Q0D2I5 559 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 TDGQ13569 410 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 PTPRCAPQ14761 206 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 QPCTQ16769 361 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 LONRF1Q17RB8 773 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 PREPLQ4J6C6 727 aaPredicted RBP10.27□□□□□ -0.76
SRP54-208ENST00000555557 PCID2Q5JVF3 399 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 CEP85LQ5SZL2 805 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 ARMC12Q5T9G4 340 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 ALS2CLQ60I27 953 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 ZNF771Q7L3S4 317 aaPredicted RBP10.27□□□□□ -0.76
SRP54-208ENST00000555557 STK40Q8N2I9 435 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 PIH1D2Q8WWB5 315 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 HEPHQ9BQS7 1158 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 ADGRE3Q9BY15 652 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 SUV39H2Q9H5I1 410 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 VIPAS39Q9H9C1 493 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 SLC2A6Q9UGQ3 507 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 RABGEF1Q9UJ41 708 aa10.27□□□□□ -0.76
SRP54-208ENST00000555557 SOX13Q9UN79 622 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms