RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CCDC89Q8N998 374 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 SPATA22Q8NHS9 363 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 GRK7Q8WTQ7 553 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 PIH1D2Q8WWB5 315 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 OXNAD1Q96HP4 312 aaPredicted RBP12.79□□□□□ -0.36
SYNE2-219ENST00000555323 TRIB3Q96RU7 358 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 RBM15Q96T37 977 aaKnown RBP eCLIP12.79□□□□□ -0.36
SYNE2-219ENST00000555323 OMDQ99983 421 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 KCNH6Q9H252 994 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 SGK2Q9HBY8 427 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 PCDH9Q9HC56 1237 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 DYRK4Q9NR20 520 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 SERGEFQ9UGK8 458 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 PHTF1Q9UMS5 762 aa12.79□□□□□ -0.36
SYNE2-219ENST00000555323 KMT2EQ8IZD2 1858 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 IGHV1OR15-9A0A0B4J2B8 117 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 AREL1O15033 823 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 PSMD3O43242 534 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 PLRG1O43660 514 aaKnown RBP12.78□□□□□ -0.36
SYNE2-219ENST00000555323 AP1G1O43747 822 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 LILRB5O75023 590 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 RNASEH2AO75792 299 aaKnown RBP12.78□□□□□ -0.36
SYNE2-219ENST00000555323 PDHA1P08559 390 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 ZSCAN5DPP0CG00 497 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 ADRB3P13945 408 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 CA4P22748 312 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 PSMB4P28070 264 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 CD6P30203 668 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 NEK3P51956 506 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 GEMP55040 296 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 TAS2R38P59533 333 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 CDK18Q07002 472 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 NEK5Q6P3R8 708 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 FBXL19Q6PCT2 694 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 RANBP10Q6VN20 620 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 PARS2Q7L3T8 475 aaKnown RBP12.78□□□□□ -0.36
SYNE2-219ENST00000555323 GSTA5Q7RTV2 222 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 PRUNE1Q86TP1 453 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 TTC7BQ86TV6 843 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 FEM1CQ96JP0 617 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 MRGPRX2Q96LB1 330 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 MLPHQ9BV36 600 aaPredicted RBP12.78□□□□□ -0.36
SYNE2-219ENST00000555323 TPSD1Q9BZJ3 242 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 BTBD1Q9H0C5 482 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 ETNK1Q9HBU6 452 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 CD93Q9NPY3 652 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 PCDHB9Q9Y5E1 797 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 PCDHGA2Q9Y5H1 932 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 ZNF318Q5VUA4 2279 aa12.78□□□□□ -0.36
SYNE2-219ENST00000555323 GOLGA6CA6NDK9 693 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 GOLGA6BA6NDN3 693 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 ERI2A8K979 691 aaKnown RBP12.77□□□□□ -0.37
SYNE2-219ENST00000555323 UPK3BL1B0FP48 263 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 ANKRD66B4E2M5 251 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 UPK3BL2E5RIL1 263 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.37
SYNE2-219ENST00000555323 ECEL1O95672 775 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 GAS8O95995 478 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 KRT14P02533 472 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 GOLGA6DP0CG33 693 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 ACSL1P33121 698 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 ADRA1AP35348 466 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 WNT3AP56704 352 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 SEMA5AQ13591 1074 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 DHX34Q14147 1143 aaKnown RBP12.77□□□□□ -0.37
SYNE2-219ENST00000555323 POM121L1PQ3SYA9 428 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 SYDE1Q6ZW31 735 aaPredicted RBP12.77□□□□□ -0.37
SYNE2-219ENST00000555323 C11orf74Q86VG3 221 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 NDUFAF2Q8N183 169 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.77□□□□□ -0.37
SYNE2-219ENST00000555323 CCHCR1Q8TD31 782 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 GAB3Q8WWW8 586 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 SCRN2Q96FV2 425 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 MCCC1Q96RQ3 725 aaPredicted RBP12.77□□□□□ -0.37
SYNE2-219ENST00000555323 LYSMD1Q96S90 227 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 ADGRE3Q9BY15 652 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 PCED1AQ9H1Q7 454 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 L2HGDHQ9H9P8 463 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 ARNT2Q9HBZ2 717 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 GOLGA6AQ9NYA3 693 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 UBP1Q9NZI7 540 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 MBD1Q9UIS9 605 aaPredicted RBP12.77□□□□□ -0.37
SYNE2-219ENST00000555323 CHKBQ9Y259 395 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 FADS3Q9Y5Q0 445 aa12.77□□□□□ -0.37
SYNE2-219ENST00000555323 A0A0J9YYE9 177 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 PLK4O00444 970 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 SPINT1O43278 529 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 HRO43593 1189 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 TSPAN6O43657 245 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 PMPCBO75439 489 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 SUN1O94901 812 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 AP2A1O95782 977 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 NDST3O95803 873 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 TRBC1P01850 177 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 NFKBIAP25963 317 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 ABL2P42684 1182 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 MAGEA6P43360 314 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 GRIA4P48058 902 aa12.76□□□□□ -0.37
SYNE2-219ENST00000555323 ADPRHP54922 357 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms