RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 TRAFD1O14545 582 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SPOPO43791 374 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 TOP3BO95985 862 aaKnown RBP12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ADRB1P08588 477 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ZNF883P0CG24 379 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 THEGLP0DJG4 465 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 HNRNPA2B1P22626 353 aaKnown RBP12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 XPAP23025 273 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 AKT2P31751 481 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SERPINB6P35237 376 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NUDT1P36639 197 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 GARSP41250 739 aaKnown RBP12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 SLC1A1P43005 524 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 RENBPP51606 427 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 FOXK2Q01167 660 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 BCL2L1Q07817 233 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 GALNT2Q10471 571 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 PTPRRQ15256 657 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 MARC1Q5VT66 337 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 KIAA1161Q6NSJ0 714 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NPNTQ6UXI9 565 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 GCNT7Q6ZNI0 430 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 Q6ZSR6 202 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 B4GALNT4Q76KP1 1039 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NAXDQ8IW45 347 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 RHOT1Q8IXI2 618 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ACRBPQ8NEB7 543 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 OR13H1Q8NG92 308 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 HCAR2Q8TDS4 363 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 RHBDD1Q8TEB9 315 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 TUBGCP5Q96RT8 1024 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 ELF4Q99607 663 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 KLF6Q99612 283 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 LACRTQ9GZZ8 138 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NOD2Q9HC29 1040 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NT5MQ9NPB1 228 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 GDF3Q9NR23 364 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 COQ6Q9Y2Z9 468 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 HS3ST3A1Q9Y663 406 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 CABIN1Q9Y6J0 2220 aa12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 NYNRINQ9P2P1 1898 aaKnown RBP12.53□□□□□ -0.4
TRAPPC6B-205ENST00000555269 A0A0U1RQJ8 604 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MATN3O15232 486 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CBFA2T3O75081 653 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 KRT1P04264 644 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 HOXB1P14653 301 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CR2P20023 1033 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MMP13P45452 471 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 EMP3P54852 163 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 HADHBP55084 474 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SIM1P81133 766 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ITKQ08881 620 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 DSG2Q14126 1118 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ZNF235Q14590 738 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 IHHQ14623 411 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 GRM3Q14832 879 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SUZ12Q15022 739 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TRIP6Q15654 476 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TMEM52BQ4KMG9 183 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ZNF542PQ5EBM4 170 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 LRRC38Q5VT99 294 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MFSD7Q6UXD7 560 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 IQCHQ86VS3 1027 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 RFX6Q8HWS3 928 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 LRRC49Q8IUZ0 686 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TMEM139Q8IV31 216 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PLD5Q8N7P1 536 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 NSMCE1Q8WV22 266 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CENPTQ96BT3 561 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 LGMNQ99538 433 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 BAG1Q99933 345 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MAK16Q9BXY0 300 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ATP13A3Q9H7F0 1226 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MBNL1Q9NR56 388 aaKnown RBP12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 RBM22Q9NW64 420 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 DTLQ9NZJ0 730 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SAE1Q9UBE0 346 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PCOLCE2Q9UKZ9 415 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PCDHB9Q9Y5E1 797 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PCDHGB2Q9Y5G2 931 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 HEY1Q9Y5J3 304 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 PLXNA2O75051 1894 aa12.52□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TSPAN11A1L157 253 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 DFNA5O60443 496 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 KRT10P13645 584 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CCNCP24863 283 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 SERPINA4P29622 427 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CDC25BP30305 580 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 MARCKSL1P49006 195 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 LIG3P49916 1009 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CCT8P50990 548 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 AP1S1P61966 158 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 DYNLT1P63172 113 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 FOXK1P85037 733 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 ADCY2Q08462 1091 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 HNRNPDQ14103 355 aaKnown RBP12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 IFI16Q16666 785 aaKnown RBP12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 TPRG1LQ5T0D9 272 aa12.51□□□□□ -0.41
TRAPPC6B-205ENST00000555269 CFAP58Q5T655 872 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms