RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SNPHO15079 494 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 CILPO75339 1184 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 ALDOAP04075 364 aaKnown RBP15.78■□□□□ 0.12
SYNE3-203ENST00000554873 C7P10643 843 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 CDH1P12830 882 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 MAGEA6P43360 314 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 PTPN9P43378 593 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 BCAR1P56945 870 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 SCYL2Q6P3W7 929 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 CATSPERGQ6ZRH7 1159 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 PCDH19Q8TAB3 1148 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 GABPB2Q8TAK5 448 aaPredicted RBP15.78■□□□□ 0.12
SYNE3-203ENST00000554873 FBXL20Q96IG2 436 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 HEXIM2Q96MH2 286 aaKnown RBP15.78■□□□□ 0.12
SYNE3-203ENST00000554873 CDK5RAP1Q96SZ6 601 aaKnown RBP15.78■□□□□ 0.12
SYNE3-203ENST00000554873 ZBED2Q9BTP6 218 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 ZBTB26Q9HCK0 441 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 PHIPQ8WWQ0 1821 aa15.78■□□□□ 0.12
SYNE3-203ENST00000554873 PEX10O60683 326 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 NTRK1P04629 796 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 GJB1P08034 283 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 NFICP08651 508 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 CEP78Q5JTW2 689 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 CCNYL2Q5T2Q4 361 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 ATF7IP2Q5U623 682 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 OR6B2Q6IFH4 312 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 ILDR2Q71H61 639 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 CHST15Q7LFX5 561 aaPredicted RBP15.77■□□□□ 0.12
SYNE3-203ENST00000554873 PIWIL3Q7Z3Z3 882 aaKnown RBP15.77■□□□□ 0.12
SYNE3-203ENST00000554873 ZFP90Q8TF47 636 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 RASSF5Q8WWW0 418 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 EMILIN2Q9BXX0 1053 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 AS3MTQ9HBK9 375 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 TXNDC16Q9P2K2 825 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 PCDHGA7Q9Y5G6 932 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 LCTP09848 1927 aa15.77■□□□□ 0.12
SYNE3-203ENST00000554873 BCLAF3A2AJT9 711 aaKnown RBP15.77■□□□□ 0.11
SYNE3-203ENST00000554873 TCAF2A6NFQ2 919 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 NEMP1O14524 444 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 TNPO2O14787 897 aaKnown RBP15.77■□□□□ 0.11
SYNE3-203ENST00000554873 APOL1O14791 398 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 CLIC3O95833 236 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 CLCQ05315 142 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 SUZ12Q15022 739 aaKnown RBP15.77■□□□□ 0.11
SYNE3-203ENST00000554873 AASDHQ4L235 1098 aaPredicted RBP15.77■□□□□ 0.11
SYNE3-203ENST00000554873 UBE2UQ5VVX9 321 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 FAM160B1Q5W0V3 765 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 MAP1SQ66K74 1059 aaPredicted RBP15.77■□□□□ 0.11
SYNE3-203ENST00000554873 FAM183BPQ6ZVS7 135 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 NEK10Q6ZWH5 1172 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 ZNF534Q76KX8 674 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 TFAP2DQ7Z6R9 452 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 MFSD4AQ8N468 514 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 ASCC1Q8N9N2 400 aaKnown RBP15.77■□□□□ 0.11
SYNE3-203ENST00000554873 MAGED4Q96JG8 741 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 FKBP14Q9NWM8 211 aa15.77■□□□□ 0.11
SYNE3-203ENST00000554873 IFT80Q9P2H3 777 aaPredicted RBP15.77■□□□□ 0.11
SYNE3-203ENST00000554873 HEATR9A2RTY3 570 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 CDK2AP1O14519 115 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 RFPL2O75678 378 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 METTL18O95568 372 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 CYP3A5P20815 502 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 MXD4Q14582 209 aaPredicted RBP15.76■□□□□ 0.11
SYNE3-203ENST00000554873 CA9Q16790 459 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 PUS10Q3MIT2 529 aaKnown RBP15.76■□□□□ 0.11
SYNE3-203ENST00000554873 CCDC14Q49A88 953 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 RALGPS2Q86X27 583 aaPredicted RBP15.76■□□□□ 0.11
SYNE3-203ENST00000554873 OFCC1Q8IZS5 231 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 MCUQ8NE86 351 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 DNERQ8NFT8 737 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 ADAM32Q8TC27 787 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 VPS33AQ96AX1 596 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 PGBD4Q96DM1 585 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 C12orf42Q96LP6 360 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 EBNA1BP2Q99848 306 aaKnown RBP15.76■□□□□ 0.11
SYNE3-203ENST00000554873 DHRS9Q9BPW9 319 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 LHPPQ9H008 270 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 UNC93B1Q9H1C4 597 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 TMEM216Q9P0N5 145 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 ACKR2O00590 384 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 BCAS1O75363 584 aaPredicted RBP15.76■□□□□ 0.11
SYNE3-203ENST00000554873 ITGB3P05106 788 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 GRIA1P42261 906 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 MAGEA3P43357 314 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 YAP1P46937 504 aaKnown RBP15.76■□□□□ 0.11
SYNE3-203ENST00000554873 MPP1Q00013 466 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 AQP6Q13520 282 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 PRKG1Q13976 671 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 PDK2Q15119 407 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 CARTPTQ16568 116 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 C6orf10Q5SRN2 563 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.76■□□□□ 0.113e-9■■■■■ 44.4
SYNE3-203ENST00000554873 PRAMEF18Q5VWM3 479 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 CYP2R1Q6VVX0 501 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 EPHX4Q8IUS5 362 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 SEPT1Q8WYJ6 367 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 C9orf16Q9BUW7 83 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 RPF1Q9H9Y2 349 aaKnown RBP15.76■□□□□ 0.11
SYNE3-203ENST00000554873 POLE4Q9NR33 117 aa15.76■□□□□ 0.11
SYNE3-203ENST00000554873 ANK1P16157 1881 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms