RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 PYGBP11216 843 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 PDGFRAP16234 1089 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 PAX3P23760 479 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 TKTP29401 623 aaKnown RBP11.28□□□□□ -0.6
SRP54-205ENST00000554803 SDC4P31431 198 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 GARSP41250 739 aaKnown RBP11.28□□□□□ -0.6
SRP54-205ENST00000554803 PRKAA2P54646 552 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 TMPRSS15P98073 1019 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 C19orf57Q0VDD7 668 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 SEMA5AQ13591 1074 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 RCN1Q15293 331 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 TEAD2Q15562 447 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 ARMC3Q5W041 872 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 WSCD1Q658N2 575 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 PMS2CLQ68D20 193 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 ANO7Q6IWH7 933 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 RAB44Q7Z6P3 723 aaPredicted RBP11.28□□□□□ -0.6
SRP54-205ENST00000554803 UNC93AQ86WB7 457 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 TMEM126BQ8IUX1 230 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 NUDCD3Q8IVD9 361 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 MFN1Q8IWA4 741 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 ADGRF2Q8IZF7 708 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 ELMOD1Q8N336 334 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 CHCHD4Q8N4Q1 142 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 PLD5Q8N7P1 536 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 APPL2Q8NEU8 664 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 RFWD2Q8NHY2 731 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 SHKBP1Q8TBC3 707 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 FAM136AQ96C01 138 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 ZNF512Q96ME7 567 aaPredicted RBP11.28□□□□□ -0.6
SRP54-205ENST00000554803 TMEM209Q96SK2 561 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 WDR83Q9BRX9 315 aaKnown RBP11.28□□□□□ -0.6
SRP54-205ENST00000554803 NT5C1AQ9BXI3 368 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 DPEP3Q9H4B8 488 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 ASAH2Q9NR71 780 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.28□□□□□ -0.6
SRP54-205ENST00000554803 ETNK2Q9NVF9 386 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 NMRK1Q9NWW6 199 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 NDUFA13Q9P0J0 144 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 DCTN4Q9UJW0 460 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 APOBEC2Q9Y235 224 aaKnown RBP11.28□□□□□ -0.6
SRP54-205ENST00000554803 PTPN13Q12923 2485 aa11.28□□□□□ -0.6
SRP54-205ENST00000554803 UPK3BL1B0FP48 263 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 UPK3BL2E5RIL1 263 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 M0QZQ0 153 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 CAPN9O14815 690 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 HUS1O60921 280 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 ENTPD5O75356 428 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 GM2AP17900 193 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 WARSP23381 471 aaKnown RBP11.27□□□□□ -0.61
SRP54-205ENST00000554803 PAX7P23759 505 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 LMO2P25791 158 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 HADHAP40939 763 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 ACADSBP45954 432 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 ZNF135P52742 658 aaPredicted RBP11.27□□□□□ -0.61
SRP54-205ENST00000554803 ACTR3P61158 418 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 MXRA7P84157 204 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 SF3A3Q12874 501 aaKnown RBP eCLIP11.27□□□□□ -0.61
SRP54-205ENST00000554803 LMAN2Q12907 356 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 STX3Q13277 289 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 DPYSL2Q16555 572 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 KCTD19Q17RG1 926 aaPredicted RBP11.27□□□□□ -0.61
SRP54-205ENST00000554803 CCDC14Q49A88 953 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 TEX44Q53QW1 395 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 TMEM196Q5HYL7 178 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 METTL21CQ5VZV1 264 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 TPGS2Q68CL5 300 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 TMEM110Q86TL2 294 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 SCUBE1Q8IWY4 988 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 CTAGE3PQ8IX95 158 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 TOP6BLQ8N6T0 577 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 PPM1NQ8N819 430 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 OR6B3Q8NGW1 331 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 PPP4R1Q8TF05 950 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 HSPH1Q92598 858 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 SERAC1Q96JX3 654 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 ZFYVE19Q96K21 471 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 SUSD3Q96L08 255 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 OLFM3Q96PB7 478 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 QKIQ96PU8 341 aaKnown RBP eCLIP11.27□□□□□ -0.614e-9■■■■■ 35.8
SRP54-205ENST00000554803 HHIPQ96QV1 700 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 TSC22D3Q99576 134 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 SLC4A5Q9BY07 1137 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 CCDC86Q9H6F5 360 aaKnown RBP11.27□□□□□ -0.61
SRP54-205ENST00000554803 NDE1Q9NXR1 346 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 EVLQ9UI08 416 aaPredicted RBP11.27□□□□□ -0.61
SRP54-205ENST00000554803 SOX13Q9UN79 622 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 HBS1LQ9Y450 684 aaKnown RBP11.27□□□□□ -0.61
SRP54-205ENST00000554803 ASB3Q9Y575 518 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 OBSL1O75147 1896 aa11.27□□□□□ -0.61
SRP54-205ENST00000554803 GABRDO14764 452 aa11.26□□□□□ -0.61
SRP54-205ENST00000554803 KCNN4O15554 427 aa11.26□□□□□ -0.61
SRP54-205ENST00000554803 OPHN1O60890 802 aa11.26□□□□□ -0.61
SRP54-205ENST00000554803 RFPL1O75677 317 aa11.26□□□□□ -0.61
SRP54-205ENST00000554803 SERPINE1P05121 402 aa11.26□□□□□ -0.61
SRP54-205ENST00000554803 PDGFRBP09619 1106 aa11.26□□□□□ -0.61
SRP54-205ENST00000554803 ODC1P11926 461 aa11.26□□□□□ -0.61
SRP54-205ENST00000554803 ALOX15P16050 662 aaPredicted RBP11.26□□□□□ -0.61
SRP54-205ENST00000554803 BGNP21810 368 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms