RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 GALNT2Q10471 571 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 CAMK1Q14012 370 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 GALNT3Q14435 633 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 IL13RA2Q14627 380 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 RALBP1Q15311 655 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 GPR68Q15743 365 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 BAK1Q16611 211 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 AP5B1Q2VPB7 878 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 SLC9C1Q4G0N8 1177 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 KIAA1755Q5JYT7 1200 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 VWA5B1Q5TIE3 1220 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ACAD10Q6JQN1 1059 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 AADACL2Q6P093 401 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 GJB7Q6PEY0 223 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF517Q6ZMY9 492 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 KRTAP5-5Q701N2 237 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 MAATS1Q7Z4T9 603 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 UBE2Q1Q7Z7E8 422 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ADGRG6Q86SQ4 1221 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ADGRF4Q8IZF3 695 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 PCYOX1LQ8NBM8 494 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 LSM14AQ8ND56 463 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF548Q8NEK5 533 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 C16orf52Q8NHV5 167 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 RFWD2Q8NHY2 731 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ZBTB10Q96DT7 871 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 RNF125Q96EQ8 232 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 HMCESQ96FZ2 354 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 APOPT1Q96IL0 206 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 SIGLEC11Q96RL6 698 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 FUZQ9BT04 418 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 KRTAP2-2Q9BYT5 123 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 AGXT2Q9BYV1 514 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ZHX3Q9H4I2 956 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 TTC12Q9H892 705 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 MOV10Q9HCE1 1003 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 PREBQ9HCU5 417 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 Q9N2J8 555 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 HEY2Q9UBP5 337 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 UPB1Q9UBR1 384 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 PNMA2Q9UL42 364 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 DHDHQ9UQ10 334 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ADGRB1O14514 1584 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 MON2Q7Z3U7 1717 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 EVPLQ92817 2033 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 CPDO75976 1380 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 NSD2O96028 1365 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 CNTNAP1P78357 1384 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ANKRD30BQ9BXX2 1392 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 PLEKHG2Q9H7P9 1386 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 GOLGA6L10A0A0M3HER8 536 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 DPPA5A6NC42 116 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CXorf65A6NEN9 183 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 C17orf100A8MU93 164 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TNPO2O14787 897 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TSPAN4O14817 238 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 MSI1O43347 362 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 HBP1O60381 514 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 UGDHO60701 494 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 MBD4O95243 580 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CD4P01730 458 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 FCGR2AP12318 317 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 GGT5P36269 586 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 GJC1P36383 396 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SKIV2L2P42285 1042 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PAFAH1B1P43034 410 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 MTNR1AP48039 350 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CPA2P48052 419 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CCT4P50991 539 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CYP2J2P51589 502 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CASP6P55212 293 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CDH15P55291 814 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 RPS13P62277 151 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TDGQ13569 410 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 LAMB3Q13751 1172 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PGM5Q15124 567 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SLC18A3Q16572 532 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 LEXMQ3ZCV2 418 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PLK5Q496M5 336 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 C5orf22Q49AR2 442 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 FAM171A1Q5VUB5 890 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SLC22A25Q6T423 547 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 LRIG3Q6UXM1 1119 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 FAM57BQ71RH2 274 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CYB5R4Q7L1T6 521 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 RSRC2Q7L4I2 434 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 SAMD14Q8IZD0 417 aaPredicted RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM217Q8N7C4 229 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PPHLN1Q8NEY8 458 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TNIP2Q8NFZ5 429 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ZCCHC10Q8TBK6 192 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 NOC3LQ8WTT2 800 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 RUFY2Q8WXA3 655 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 RFFLQ8WZ73 363 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 CNOT9Q92600 299 aaKnown RBP1.63□□□□□ -2.15
PRPF39-208ENST00000554785 ZUFSPQ96AP4 578 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 VCPIP1Q96JH7 1222 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM79Q9BSE2 394 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 PIMREGQ9BSJ6 248 aa1.63□□□□□ -2.15
PRPF39-208ENST00000554785 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms