RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 VPS52Q8N1B4 723 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 PQLC1Q8N2U9 271 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 LEMD2Q8NC56 503 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 PPFIBP2Q8ND30 876 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ACVR1CQ8NER5 493 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CLEC4CQ8WTT0 213 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 UCMAQ8WVF2 138 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SLC39A7Q92504 469 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF622Q969S3 477 aaKnown RBP eCLIP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM125Q96AQ2 219 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ECHDC3Q96DC8 303 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TCF12Q99081 682 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 HOPXQ9BPY8 73 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FAM167BQ9BTA0 163 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 KLHL4Q9C0H6 718 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TUBB1Q9H4B7 451 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 NXF3Q9H4D5 531 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FBXO6Q9NRD1 293 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 DDX18Q9NVP1 670 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CACNA2D2Q9NY47 1150 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ZIM2Q9NZV7 527 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CHORDC1Q9UHD1 332 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 IPPQ9Y573 584 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SNX9Q9Y5X1 595 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 MAD1L1Q9Y6D9 718 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 DSPPQ9NZW4 1301 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 C7orf72A4D263 438 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 RNF103O00237 685 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 DIAPH2O60879 1101 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 FZD7O75084 574 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SULT1C4O75897 302 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 WDR47O94967 919 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 EOMESO95936 686 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GLUD1P00367 558 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ALDOCP09972 364 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 THRAP10827 490 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CHRM3P20309 590 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 PIK3R1P27986 724 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 FRKP42685 505 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 RPL14P50914 215 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CHN2P52757 468 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CXCR4P61073 352 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 IL10RBQ08334 325 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CDC20Q12834 499 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 BNIP2Q12982 314 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 FADDQ13158 208 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM259Q4ZIN3 620 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SPATA19Q7Z5L4 167 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 MRGPREQ86SM8 312 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF605Q86T29 641 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CEP97Q8IW35 865 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 RBM12BQ8IXT5 1001 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ADGRG5Q8IZF4 528 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TTC30BQ8N4P2 665 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 COLGALT1Q8NBJ5 622 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 RNF149Q8NC42 400 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 C3orf58Q8NDZ4 430 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 OR13F1Q8NGS4 319 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 URGCPQ8TCY9 931 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 MARK4Q96L34 752 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 FAM111AQ96PZ2 611 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TUBGCP5Q96RT8 1024 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GATA5Q9BWX5 397 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 COG4Q9H9E3 785 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CDHR5Q9HBB8 845 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GLOD4Q9HC38 313 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ANKHQ9HCJ1 492 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CCDC177Q9NQR7 707 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 FBXO8Q9NRD0 319 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 PLCXD1Q9NUJ7 323 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SLC38A7Q9NVC3 462 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 AIG1Q9NVV5 245 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ACTR3BQ9P1U1 418 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 STK38LQ9Y2H1 464 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 AP3M1Q9Y2T2 418 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 PCDHB3Q9Y5E6 796 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 COPG1Q9Y678 874 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 WASF2Q9Y6W5 498 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 A0A087WZ62 844 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GOLGA8QA0A0J9YX86 632 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GOLGA8OA6NCC3 632 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GOLGA8NF8WBI6 632 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 PRAMEF11O60813 436 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 KLHL18O94889 574 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 NDST3O95803 873 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 PRLP01236 227 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CHRNA1P02708 482 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 AHSGP02765 367 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 MT-ND3P03897 115 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SSBP05455 408 aaKnown RBP eCLIP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 RHOQP17081 205 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GOT1P17174 413 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 VCLP18206 1134 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CTGFP29279 349 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 RYKP34925 604 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SPRP35270 261 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GRIA1P42261 906 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CASP2P42575 452 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TAF6P49848 677 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms