RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 GJC3Q8NFK1 279 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 B4GALNT2Q8NHY0 566 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 OTULINQ96BN8 352 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 PPM1MQ96MI6 270 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 AGXT2Q9BYV1 514 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 SLC25A18Q9H1K4 315 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 PREBQ9HCU5 417 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 TMEM51Q9NW97 253 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 KCND2Q9NZV8 630 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 MPP6Q9NZW5 540 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 CAMK2AQ9UQM7 478 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 CARD8Q9Y2G2 431 aa5.26□□□□□ -1.57
SCFD1-211ENST00000554437 FAM90A8PA6NJQ4 464 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 RGS11O94810 467 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 SOX30O94993 753 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 FAM90A13PP0C7W8 464 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 FAM90A24PP0C7X0 464 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 PCYT1AP49585 367 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 DSC1Q08554 894 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 Q0VFX4 171 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 ITGADQ13349 1161 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 CTTNQ14247 550 aaKnown RBP5.25□□□□□ -1.57
SCFD1-211ENST00000554437 PRICKLE4Q2TBC4 344 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 ESCO2Q56NI9 601 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 CPLX2Q6PUV4 134 aaKnown RBP5.25□□□□□ -1.57
SCFD1-211ENST00000554437 H1FNTQ75WM6 255 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-211ENST00000554437 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-211ENST00000554437 ZDHHC17Q8IUH5 632 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 MIB2Q96AX9 1013 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 KLHL29Q96CT2 875 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 BBS4Q96RK4 519 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 SIN3AQ96ST3 1273 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 SLC26A6Q9BXS9 759 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 SARDHQ9UL12 918 aa5.25□□□□□ -1.57
SCFD1-211ENST00000554437 MTA2O94776 668 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 HEXAP06865 529 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 LDHCP07864 332 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 ABCD1P33897 745 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 CASP2P42575 452 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 EFNA5P52803 228 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 ADORA2A-AS1P86434 159 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 CRYZQ08257 329 aaKnown RBP5.24□□□□□ -1.57
SCFD1-211ENST00000554437 ST3GAL1Q11201 340 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 PTP4A2Q12974 167 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 TBX2Q13207 712 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-211ENST00000554437 PPP2R5BQ15173 497 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 HIST2H2ACQ16777 129 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-211ENST00000554437 SOWAHAQ2M3V2 549 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 LRRC8EQ6NSJ5 796 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 SFTPA2Q8IWL1 248 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 PARP16Q8N5Y8 322 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 OR14A16Q8NHC5 309 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 NFKBIDQ8NI38 313 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 ADAMTS14Q8WXS8 1223 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 LYZL4Q96KX0 146 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 MXRA8Q9BRK3 442 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 ZPBPQ9BS86 351 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 TMEM204Q9BSN7 226 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 CLK4Q9HAZ1 481 aaKnown RBP5.24□□□□□ -1.57
SCFD1-211ENST00000554437 CYSLTR2Q9NS75 346 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 NAALADL1Q9UQQ1 740 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 TMEM98Q9Y2Y6 226 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 FAM96BQ9Y3D0 163 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 A3GALT2U3KPV4 340 aa5.24□□□□□ -1.57
SCFD1-211ENST00000554437 A0A1B0GVM2 712 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 TIMM44O43615 452 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 IRF1P10914 325 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 ELF1P32519 619 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 KRT9P35527 623 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 ARL1P40616 181 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-211ENST00000554437 AMTP48728 403 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 THBS3P49746 956 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 CASP6P55212 293 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 NEXNQ0ZGT2 675 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 SIM2Q14190 667 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-211ENST00000554437 SLC4A8Q2Y0W8 1093 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 TDRD12Q587J7 1177 aaKnown RBP5.23□□□□□ -1.57
SCFD1-211ENST00000554437 TYW3Q6IPR3 259 aaKnown RBP5.23□□□□□ -1.57
SCFD1-211ENST00000554437 CCDC105Q8IYK2 499 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 C9orf106Q8NAJ2 232 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 TRIB2Q92519 343 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 SAAL1Q96ER3 474 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 H2AFJQ9BTM1 129 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 SMYD2Q9NRG4 433 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 PAM16Q9Y3D7 125 aa5.23□□□□□ -1.57
SCFD1-211ENST00000554437 IGHV4-28A0A0C4DH34 117 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 A0A0U1RQF3 1178 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 SMAD6O43541 496 aaKnown RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 GLUD1P00367 558 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 PRSS2P07478 247 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 NGFRP08138 427 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 ACAA1P09110 424 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 RPL3P39023 403 aaKnown RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 GLUD2P49448 558 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 HARS2P49590 506 aaKnown RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 CTCFP49711 727 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 NANOS2P60321 138 aaKnown RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 POU5F1Q01860 360 aaKnown RBP5.22□□□□□ -1.57
SCFD1-211ENST00000554437 KCTD2Q14681 263 aa5.22□□□□□ -1.57
SCFD1-211ENST00000554437 RNPS1Q15287 305 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms