RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 MMP20O60882 483 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 NEBLO76041 1014 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 TPM3P06753 285 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 ATP1A3P13637 1013 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 SERPINB6P35237 376 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 EIF4A3P38919 411 aaKnown RBP10.86□□□□□ -0.67
PNN-203ENST00000554117 ABL2P42684 1182 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 UCNP55089 124 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 PEX6Q13608 980 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 SPIDRQ14159 915 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 FZD2Q14332 565 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 ZNF235Q14590 738 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 ACAP1Q15027 740 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 PPP1R15BQ5SWA1 713 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 MARCH9Q86YJ5 346 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 PHACTR4Q8IZ21 702 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 DCBLD1Q8N8Z6 715 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 ZNF653Q96CK0 615 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 IQCDQ96DY2 449 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 EXOC2Q96KP1 924 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 ZNF578Q96N58 590 aaPredicted RBP10.86□□□□□ -0.67
PNN-203ENST00000554117 UBL7Q96S82 380 aaPredicted RBP10.86□□□□□ -0.67
PNN-203ENST00000554117 EDEM3Q9BZQ6 932 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 THSD1Q9NS62 852 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 UCKL1Q9NWZ5 548 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 MYO1AQ9UBC5 1043 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 CNOT8Q9UFF9 292 aaKnown RBP10.86□□□□□ -0.67
PNN-203ENST00000554117 PCSK1NQ9UHG2 260 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 ACTL7AQ9Y615 435 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 BZW2Q9Y6E2 419 aaKnown RBP10.86□□□□□ -0.67
PNN-203ENST00000554117 ASXL3Q9C0F0 2248 aa10.86□□□□□ -0.67
PNN-203ENST00000554117 A0A1W2PQC6 194 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 TMX2-CTNND1H3BSU7 103 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 CACNB4O00305 520 aaPredicted RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 PDE2AO00408 941 aaPredicted RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 BRINP1O60477 761 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 USP12O75317 370 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 CSO75390 466 aaKnown RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 TCEA3O75764 348 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 RASGRP1O95267 797 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 CD160O95971 181 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 TNFP01375 233 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 ELFN1P0C7U0 828 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 PTMSP20962 102 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 HSPA9P38646 679 aaKnown RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 EIF2S3P41091 472 aaKnown RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 ZNF165P49910 485 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 PFN3P60673 137 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 GABREP78334 506 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 IL10RBQ08334 325 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 BIRC2Q13490 618 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 CDKN3Q16667 212 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 UGP2Q16851 508 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 TSR1Q2NL82 804 aaKnown RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 DEFB133Q30KQ1 61 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 TBC1D25Q3MII6 688 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 TMEM52BQ4KMG9 183 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 RAB6CQ53S08 254 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 LRRC73Q5JTD7 316 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 RBM44Q6ZP01 1051 aaKnown RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 EFL1Q7Z2Z2 1120 aaKnown RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 RD3Q7Z3Z2 195 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 SRLQ86TD4 932 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 HID1Q8IV36 788 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 ARL14Q8N4G2 192 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 SNIP1Q8TAD8 396 aaKnown RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 FNIP1Q8TF40 1166 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.85□□□□□ -0.67
PNN-203ENST00000554117 STRADBQ9C0K7 418 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 RAB6CQ9H0N0 254 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 HAUS4Q9H6D7 363 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 RTN4Q9NQC3 1192 aaKnown RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 KLQ9UEF7 1012 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 ITM2BQ9Y287 266 aa10.85□□□□□ -0.67
PNN-203ENST00000554117 ZNF106Q9H2Y7 1883 aaKnown RBP10.85□□□□□ -0.67
PNN-203ENST00000554117 CFAP47Q6ZTR5 3102 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 CFAP69A5D8W1 941 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 LMO7DNF2Z398 122 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 AREL1O15033 823 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 MUSKO15146 869 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 RAD51BO15315 384 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 PRAMEF11O60813 436 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 PIGNO95427 931 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 FTLP02792 175 aaPredicted RBP10.84□□□□□ -0.67
PNN-203ENST00000554117 SSR1P43307 286 aaKnown RBP10.84□□□□□ -0.67
PNN-203ENST00000554117 CSNK1DP48730 415 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 PAPOLAP51003 745 aaKnown RBP10.84□□□□□ -0.67
PNN-203ENST00000554117 ADKP55263 362 aaKnown RBP10.84□□□□□ -0.67
PNN-203ENST00000554117 TMPRSS3P57727 454 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 ERVPABLB-1P60509 514 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 AP1S1P61966 158 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 CCDC173Q0VFZ6 552 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 MAMLD1Q13495 774 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 MTM1Q13496 603 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 PIGHQ14442 188 aaPredicted RBP10.84□□□□□ -0.67
PNN-203ENST00000554117 IRF4Q15306 451 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 C6orf132Q5T0Z8 1188 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 PLEKHA7Q6IQ23 1121 aa10.84□□□□□ -0.67
PNN-203ENST00000554117 CAVIN1Q6NZI2 390 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms