RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 SARDHQ9UL12 918 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 PLAAQ9Y263 795 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 A0A1W2PQU0 124 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 LRRIQ3A6PVS8 624 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-224ENST00000554040 H3BQV1 296 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 TMX2-CTNND1H3BSU7 103 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 TPP1O14773 563 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 MUSKO15146 869 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 MOCS3O95396 460 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 ASS1P00966 412 aaKnown RBP7.03□□□□□ -1.28
ATXN3-224ENST00000554040 GLI1P08151 1106 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 HGFP14210 728 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 PRLRP16471 622 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 POU3F2P20265 443 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-224ENST00000554040 HNRNPA2B1P22626 353 aaKnown RBP7.03□□□□□ -1.28
ATXN3-224ENST00000554040 GNA15P30679 374 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 SLC6A4P31645 630 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 GDNFP39905 211 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 NNMTP40261 264 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 SLC11A2P49281 568 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 POLE2P56282 527 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 CLDN2P57739 230 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 TAS2R38P59533 333 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 RPS26P62854 115 aaKnown RBP7.03□□□□□ -1.28
ATXN3-224ENST00000554040 CNTN1Q12860 1018 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 KCNAB2Q13303 367 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 SPIDRQ14159 915 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 DRAP1Q14919 205 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-224ENST00000554040 ZNF284Q2VY69 593 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 DEFB133Q30KQ1 61 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 PITRM1Q5JRX3 1037 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 RNF219Q5W0B1 726 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-224ENST00000554040 BSPRYQ5W0U4 402 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 SPOPLQ6IQ16 392 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 NEK5Q6P3R8 708 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 BORAQ6PGQ7 559 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 CCDC73Q6ZRK6 1079 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 MMS22LQ6ZRQ5 1243 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 EPM2AIP1Q7L775 607 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-224ENST00000554040 BHLHA9Q7RTU4 235 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 ABI3BPQ7Z7G0 1075 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 B3GNT8Q7Z7M8 397 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 PIGZQ86VD9 579 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 C1QL4Q86Z23 238 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 CCDC117Q8IWD4 279 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-224ENST00000554040 UNC45BQ8IWX7 931 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 CARNMT1Q8N4J0 409 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 PARD3BQ8TEW8 1205 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 RNF139Q8WU17 664 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 FRS2Q8WU20 508 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 OR8D1Q8WZ84 308 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 NAT6Q93015 286 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 AZIN2Q96A70 460 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 MIB2Q96AX9 1013 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 KIRREL1Q96J84 757 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 SLC38A3Q99624 504 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 MYOCQ99972 504 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 CCDC3Q9BQI4 270 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 ULBP1Q9BZM6 244 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 STRADBQ9C0K7 418 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 CYP3A43Q9HB55 503 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 FZD3Q9NPG1 666 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 CEP83Q9Y592 693 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 HS3ST3A1Q9Y663 406 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 DOCK9Q9BZ29 2069 aa7.03□□□□□ -1.28
ATXN3-224ENST00000554040 LRBAP50851 2863 aa7.02□□□□□ -1.28
ATXN3-224ENST00000554040 SETD2Q9BYW2 2564 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 SPTY2D1-AS1A0A0U1RR47 76 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 A0A1W2PQ27 194 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 A0A1W2PQ64 194 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 A0A1W2PQC6 194 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 AQP9O43315 295 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 MSI1O43347 362 aaKnown RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 ACSL4O60488 711 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 EXOC3O60645 756 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 IGLV3-27P01718 113 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 JMJD7P0C870 316 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 VAV1P15498 845 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 NME1P15531 152 aaKnown RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 STK19P49842 368 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 TKTL1P51854 596 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 RPS24P62847 133 aaKnown RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 CDH18Q13634 790 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 FZD2Q14332 565 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 ZACNQ401N2 412 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 NUGGCQ68CJ6 796 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 GCNT7Q6ZNI0 430 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 THAP5Q7Z6K1 395 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 HORMAD1Q86X24 394 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 ZFAND4Q86XD8 727 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 C12orf56Q8IXR9 622 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 SLC35F3Q8IY50 421 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 APCDD1Q8J025 514 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 HJURPQ8NCD3 748 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 LMX1AQ8TE12 382 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 MYEOVQ96EZ4 313 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 BMFQ96LC9 184 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 PRICKLE1Q96MT3 831 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-224ENST00000554040 FRMD6Q96NE9 622 aa7.02□□□□□ -1.29
ATXN3-224ENST00000554040 IL12RB2Q99665 862 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms