RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CDC20Q12834 499 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 AGERQ15109 404 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 C14orf28Q4W4Y0 310 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 LRRC73Q5JTD7 316 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 MANEALQ5VSG8 457 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 ERICH6BQ5W0A0 696 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 ATL3Q6DD88 541 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 FOXR2Q6PJQ5 311 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 FAM183BPQ6ZVS7 135 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 RRAGAQ7L523 313 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 SLC26A9Q7LBE3 791 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 ZNF397Q8NF99 534 aaPredicted RBP9.17□□□□□ -0.94
PRKCH-208ENST00000553846 SPATA20Q8TB22 786 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 SCG3Q8WXD2 468 aaKnown RBP9.17□□□□□ -0.94
PRKCH-208ENST00000553846 OR1E3Q8WZA6 343 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 ARHGEF2Q92974 986 aaKnown RBP9.17□□□□□ -0.94
PRKCH-208ENST00000553846 PGAP3Q96FM1 320 aaPredicted RBP9.17□□□□□ -0.94
PRKCH-208ENST00000553846 DDA1Q9BW61 102 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 TM6SF2Q9BZW4 377 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 ZDHHC6Q9H6R6 413 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 RDH14Q9HBH5 336 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 FGF22Q9HCT0 170 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 COX16Q9P0S2 106 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 HECAQ9UBI9 543 aaPredicted RBP9.17□□□□□ -0.94
PRKCH-208ENST00000553846 PILRAQ9UKJ1 303 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 DAAM1Q9Y4D1 1078 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 B3GALT1Q9Y5Z6 326 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 ESPL1Q14674 2120 aa9.17□□□□□ -0.94
PRKCH-208ENST00000553846 HIVEP1P15822 2718 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 TSPAN11A1L157 253 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 ZNF891A8MT65 544 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-208ENST00000553846 BECN2A8MW95 431 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 SEMA7AO75326 666 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 GRAP2O75791 330 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 TM7SF2O76062 418 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 CPNE6O95741 557 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 GSRP00390 522 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 F13A1P00488 732 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 ERBB2P04626 1255 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 UGT2B4P06133 528 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 ZSCAN22P10073 491 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-208ENST00000553846 NR1D1P20393 614 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 OR1E1P30953 314 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 CSF2RBP32927 897 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 ACVRL1P37023 503 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 PRCPP42785 496 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 ATP1A2P50993 1020 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 FKBP3Q00688 224 aaKnown RBP9.16□□□□□ -0.94
PRKCH-208ENST00000553846 NME3Q13232 169 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 SQSTM1Q13501 440 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 PKP1Q13835 747 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 CLPPQ16740 277 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-208ENST00000553846 KLHL40Q2TBA0 621 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 TMEM52BQ4KMG9 183 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 CRTC2Q53ET0 693 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-208ENST00000553846 LACTB2Q53H82 288 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-208ENST00000553846 BRMS1LQ5PSV4 323 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 PHF19Q5T6S3 580 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 ANKRD40Q6AI12 368 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 RETSATQ6NUM9 610 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 GKN2Q86XP6 184 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 RCBTB1Q8NDN9 531 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 ZNF606Q8WXB4 792 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 ARHGEF26Q96DR7 871 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 C1orf74Q96LT6 269 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 CCDC74BQ96LY2 380 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 TAAR9Q96RI9 348 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 TKTL2Q9H0I9 626 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 SIK2Q9H0K1 926 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 UPF2Q9HAU5 1272 aaKnown RBP9.16□□□□□ -0.94
PRKCH-208ENST00000553846 NDFIP2Q9NV92 336 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 LRIT1Q9P2V4 623 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 DKK3Q9UBP4 350 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 ARMCX3Q9UH62 379 aaPredicted RBP9.16□□□□□ -0.94
PRKCH-208ENST00000553846 OR1A2Q9Y585 309 aa9.16□□□□□ -0.94
PRKCH-208ENST00000553846 MTORP42345 2549 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 TRIM49BA6NDI0 452 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 TMEM202A6NGA9 273 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 TMEM110-MUSTN1A8MSY1 372 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 RAD1O60671 282 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 PRKCGP05129 697 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 KRT7P08729 469 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 THRAP10827 490 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 TIMP2P16035 220 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 BMP6P22004 513 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 CD1CP29017 333 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 LIMK2P53671 638 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 MLLT10P55197 1068 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 GNA12Q03113 381 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 DNM1Q05193 864 aaKnown RBP9.15□□□□□ -0.94
PRKCH-208ENST00000553846 KLRB1Q12918 225 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 LRRC14Q15048 493 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 FOXD4L6Q3SYB3 417 aaPredicted RBP9.15□□□□□ -0.94
PRKCH-208ENST00000553846 PTPN20Q4JDL3 420 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 ATP1A1-AS1Q5TC04 95 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 TMEM164Q5U3C3 297 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 SPECC1LQ69YQ0 1117 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 ZNF787Q6DD87 383 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 TRNP1Q6NT89 227 aa9.15□□□□□ -0.94
PRKCH-208ENST00000553846 FOXD4L3Q6VB84 417 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms