RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ARRDC3Q96B67 414 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 GRAMD1AQ96CP6 724 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 WDR89Q96FK6 387 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-219ENST00000553488 BTN2A3PQ96KV6 586 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 DUSP23Q9BVJ7 150 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 KCNF1Q9H3M0 494 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 ACSS3Q9H6R3 686 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 IL17BQ9UHF5 180 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 KIAA1257Q9ULG3 409 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 OR51B4Q9Y5P0 310 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 ICE1Q9Y2F5 2266 aa7.45□□□□□ -1.22
ATXN3-219ENST00000553488 ANKRD36A6QL64 1941 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 ITPR2Q14571 2701 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 FAM237AA0A1B0GTK4 181 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 SCO2A0A1W2PP80 73 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 EME2A4GXA9 379 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 A6NNZ2 444 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 KIAA1324LA8MWY0 1029 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 KCNU1A8MYU2 1149 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 F5H5T6 163 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 TCEA3O75764 348 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 TRUB2O95900 331 aaKnown RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 TGFB1P01137 390 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 APOEP02649 317 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 CSF2P04141 144 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 GSTP1P09211 210 aaKnown RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 EPB41P11171 864 aaKnown RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 SRCP12931 536 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 ITGB6P18564 788 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 TBXAS1P24557 533 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 RBMS1P29558 406 aaKnown RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 AKT2P31751 481 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 NNMTP40261 264 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 DUSP3P51452 185 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 HNRNPKP61978 463 aaKnown RBP eCLIP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 NFATC3Q12968 1075 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 ZNF177Q13360 481 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 DLG2Q15700 870 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 CNGA2Q16280 664 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 CDKN3Q16667 212 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 ZNF542PQ5EBM4 170 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 DCAF17Q5H9S7 520 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 SEL1L3Q68CR1 1132 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 OR6B2Q6IFH4 312 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 FBXL22Q6P050 247 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 NEK5Q6P3R8 708 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 SEZ6L2Q6UXD5 910 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 DNAJC14Q6Y2X3 702 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 CCDC81Q6ZN84 652 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 RBM44Q6ZP01 1051 aaKnown RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 EFL1Q7Z2Z2 1120 aaKnown RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 PTAR1Q7Z6K3 402 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 PARGQ86W56 976 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 SMYD4Q8IYR2 804 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-219ENST00000553488 FBLIM1Q8WUP2 373 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 KAT5Q92993 513 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 SLC35C1Q96A29 364 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 FAM149B1Q96BN6 582 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 BMFQ96LC9 184 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 PSMB7Q99436 277 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 FEM1AQ9BSK4 669 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 MIS12Q9H081 205 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 OSBPL2Q9H1P3 480 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 STARD5Q9NSY2 213 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 DNAJC28Q9NX36 388 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 USP25Q9UHP3 1055 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 SLC25A13Q9UJS0 675 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 RCOR1Q9UKL0 485 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 HS3ST2Q9Y278 367 aa7.44□□□□□ -1.22
ATXN3-219ENST00000553488 ZFC3H1O60293 1989 aaKnown RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 CENPEQ02224 2701 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 SPTY2D1-AS1A0A0U1RR47 76 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 FAM95CA0A1B0GW59 222 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 POM121BA6NF01 834 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 NEMP2A6NFY4 417 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 RAD51BO15315 384 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 TMPRSS2O15393 492 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 SLC16A3O15427 465 aaKnown RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 MT-CO1P00395 513 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 CENPBP07199 599 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 ITGA2BP08514 1039 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 ZSCAN22P10073 491 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 CMA1P23946 247 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 GSTT1P30711 240 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 GPD2P43304 727 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 NFKB2Q00653 900 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 LRMPQ12912 555 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 SRSF6Q13247 344 aaKnown RBP7.43□□□□□ -1.22
ATXN3-219ENST00000553488 PKP1Q13835 747 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 STILQ15468 1287 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 ZSCAN23Q3MJ62 389 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 C5orf22Q49AR2 442 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 COLEC12Q5KU26 742 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 RABGAP1LQ5R372 815 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 TCERG1LQ5VWI1 586 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 CRTC1Q6UUV9 634 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 Q6ZSR6 202 aa7.43□□□□□ -1.22
ATXN3-219ENST00000553488 SLC35F3Q8IY50 421 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms