RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 ATXN3P54252 364 aaPredicted RBP18.63■□□□□ 0.57
CPSF2-202ENST00000553427 IFI35P80217 286 aaPredicted RBP18.63■□□□□ 0.57
CPSF2-202ENST00000553427 ELP6Q0PNE2 266 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 UGP2Q16851 508 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 CFAP58Q5T655 872 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 SEL1L3Q68CR1 1132 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 TTC7BQ86TV6 843 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 NT5DC3Q86UY8 548 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 MINDY1Q8N5J2 469 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 MFSD2AQ8NA29 543 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 SKA1Q96BD8 255 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 POLR1EQ9GZS1 481 aaKnown RBP18.63■□□□□ 0.57
CPSF2-202ENST00000553427 FSCN3Q9NQT6 498 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 TRIM10Q9UDY6 481 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 PLXNA2O75051 1894 aa18.63■□□□□ 0.57
CPSF2-202ENST00000553427 A0A0U1RQJ8 604 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 A0A1B0GVT2 93 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 C4orf47A7E2U8 309 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 MIF4GDA9UHW6 222 aaKnown RBP18.62■□□□□ 0.57
CPSF2-202ENST00000553427 NRDCO43847 1150 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 CST8O60676 142 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 GJB3O75712 270 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 CER1O95813 267 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 ZNF883P0CG24 379 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 CCNB1P14635 433 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 HNRNPA2B1P22626 353 aaKnown RBP18.62■□□□□ 0.57
CPSF2-202ENST00000553427 CTSKP43235 329 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 PEX5P50542 639 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 CCZ1BP86790 482 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 CCZ1P86791 482 aaPredicted RBP18.62■□□□□ 0.57
CPSF2-202ENST00000553427 TMEM52BQ4KMG9 183 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 SLC45A4Q5BKX6 768 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 ZSWIM9Q86XI8 627 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 CCNYQ8ND76 341 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 FAM174AQ8TBP5 190 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 NSMCE3Q96MG7 304 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 LGMNQ99538 433 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 IL12RB2Q99665 862 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 GTPBP2Q9BX10 602 aaKnown RBP18.62■□□□□ 0.57
CPSF2-202ENST00000553427 C1QTNF2Q9BXJ5 285 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 NOD2Q9HC29 1040 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 NT5MQ9NPB1 228 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 SCUBE2Q9NQ36 999 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 AASDHPPTQ9NRN7 309 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 ITM2BQ9Y287 266 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 ANKRD6Q9Y2G4 727 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 ATP8A1Q9Y2Q0 1164 aa18.62■□□□□ 0.57
CPSF2-202ENST00000553427 NEMP1O14524 444 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 WNT9AO14904 365 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 KRT86O43790 486 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 KRT10P13645 584 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 XPAP23025 273 aaPredicted RBP18.61■□□□□ 0.57
CPSF2-202ENST00000553427 AKT2P31751 481 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 MMP12P39900 470 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 RWDD2BP57060 319 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 POLR2LP62875 67 aaKnown RBP18.61■□□□□ 0.57
CPSF2-202ENST00000553427 DYNLT1P63172 113 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 SLC14A1Q13336 389 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 KIF19Q2TAC6 998 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 ERAP2Q6P179 960 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 BBS12Q6ZW61 710 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 PEX26Q7Z412 305 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 ADAT2Q7Z6V5 191 aaKnown RBP18.61■□□□□ 0.57
CPSF2-202ENST00000553427 CCDC50Q8IVM0 306 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 DENND6BQ8NEG7 585 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 LENG8Q96PV6 779 aaPredicted RBP18.61■□□□□ 0.57
CPSF2-202ENST00000553427 SLC17A9Q9BYT1 436 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 PCDH12Q9NPG4 1184 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 RBM22Q9NW64 420 aaKnown RBP eCLIP18.61■□□□□ 0.57
CPSF2-202ENST00000553427 GGT7Q9UJ14 662 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 AMFRQ9UKV5 643 aa18.61■□□□□ 0.57
CPSF2-202ENST00000553427 CFAP69A5D8W1 941 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 RIOK3O14730 519 aaKnown RBP18.6■□□□□ 0.57
CPSF2-202ENST00000553427 DFNA5O60443 496 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 MAGEC1O60732 1142 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 OPHN1O60890 802 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 WNT1P04628 370 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 CCDC175P0C221 793 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 PRLRP16471 622 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 C21orf59P57076 290 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 MAXP61244 160 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 FGL2Q14314 439 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 PRKD1Q15139 912 aaPredicted RBP18.6■□□□□ 0.57
CPSF2-202ENST00000553427 ZNF423Q2M1K9 1284 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 NPNTQ6UXI9 565 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 ALG3Q92685 438 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 SEMA3CQ99985 751 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 SNX11Q9Y5W9 270 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 CAPN6Q9Y6Q1 641 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 SHROOM3Q8TF72 1996 aa18.6■□□□□ 0.57
CPSF2-202ENST00000553427 KNL1Q8NG31 2342 aa18.59■□□□□ 0.57
CPSF2-202ENST00000553427 IGLON5A6NGN9 336 aa18.59■□□□□ 0.57
CPSF2-202ENST00000553427 TLR4O00206 839 aa18.59■□□□□ 0.57
CPSF2-202ENST00000553427 SLC31A1O15431 190 aa18.59■□□□□ 0.57
CPSF2-202ENST00000553427 HLA-DQB2P05538 268 aa18.59■□□□□ 0.57
CPSF2-202ENST00000553427 PECAM1P16284 738 aaPredicted RBP18.59■□□□□ 0.57
CPSF2-202ENST00000553427 CETN2P41208 172 aa18.59■□□□□ 0.57
CPSF2-202ENST00000553427 NXPH1P58417 271 aa18.59■□□□□ 0.57
CPSF2-202ENST00000553427 ADCY2Q08462 1091 aa18.59■□□□□ 0.57
CPSF2-202ENST00000553427 TRAF2Q12933 501 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms