RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CXorf51AA0A1B0GTR3 108 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 FAM72CH0Y354 149 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 TMX2-CTNND1H3BSU7 103 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 FOXN3O00409 490 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-209ENST00000553308 TOR1BO14657 336 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 TMCC1O94876 653 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 RASGRP1O95267 797 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 POP4O95707 220 aaKnown RBP9.18□□□□□ -0.94
SYNE2-209ENST00000553308 TIMP2P16035 220 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 CDH5P33151 784 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-209ENST00000553308 ETFBP38117 255 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 GABRB2P47870 512 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 BLKP51451 505 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 MAPK10P53779 464 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 GEMIN4P57678 1058 aaKnown RBP9.18□□□□□ -0.94
SYNE2-209ENST00000553308 ATP11AP98196 1134 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 TLE1Q04724 770 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 ZFP36L1Q07352 338 aaKnown RBP9.18□□□□□ -0.94
SYNE2-209ENST00000553308 NFATC4Q14934 902 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 CLCA4Q14CN2 919 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 LRRC14Q15048 493 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 WSCD2Q2TBF2 565 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 LRRK1Q38SD2 2015 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 FAM72AQ5TYM5 149 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 FAM72DQ6L9T8 149 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 RWDD4Q6NW29 188 aaKnown RBP9.18□□□□□ -0.94
SYNE2-209ENST00000553308 ZNF574Q6ZN55 896 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-209ENST00000553308 TMPRSS9Q7Z410 1059 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 FAM72BQ86X60 149 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 GKN2Q86XP6 184 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 LURAP1LQ8IV03 231 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 EMC1Q8N766 993 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 TMEM35BQ8NCS4 154 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 GPR156Q8NFN8 814 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 USP7Q93009 1102 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 C18orf8Q96DM3 657 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 PDXPQ96GD0 296 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 GDAP1L1Q96MZ0 367 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 SEMA3CQ99985 751 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 FUCA2Q9BTY2 467 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 MAGEB5Q9BZ81 275 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 SEPT10Q9P0V9 454 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 KLQ9UEF7 1012 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 TMEM59LQ9UK28 342 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 OR1A2Q9Y585 309 aa9.18□□□□□ -0.94
SYNE2-209ENST00000553308 SPTA1P02549 2419 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 AHCTF1Q8WYP5 2266 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 C9orf172C9J069 976 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 INSIG1O15503 277 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 RAMP2O60895 175 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 PPFIA2O75334 1257 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 FGFR1OPO95684 399 aaKnown RBP9.17□□□□□ -0.94
SYNE2-209ENST00000553308 PCCBP05166 539 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 SFTPCP11686 197 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 CYP11B1P15538 503 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 RHOQP17081 205 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 MAPKAPK2P49137 400 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 PEX5P50542 639 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 SRP54P61011 504 aaKnown RBP9.17□□□□□ -0.94
SYNE2-209ENST00000553308 INPP5AQ14642 412 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 CDO1Q16878 200 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 C15orf59Q2T9L4 293 aaPredicted RBP9.17□□□□□ -0.94
SYNE2-209ENST00000553308 TMEM52BQ4KMG9 183 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 CERCAMQ5T4B2 595 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 TAF3Q5VWG9 929 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 SPRED1Q7Z699 444 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 DTX1Q86Y01 620 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 SLITRK4Q8IW52 837 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 ELOA2Q8IYF1 753 aaPredicted RBP9.17□□□□□ -0.94
SYNE2-209ENST00000553308 FAM71AQ8IYT1 594 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 ZSCAN1Q8NBB4 408 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 OR6C4Q8NGE1 309 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 JPH3Q8WXH2 748 aaPredicted RBP9.17□□□□□ -0.94
SYNE2-209ENST00000553308 RBM15Q96T37 977 aaKnown RBP eCLIP9.17□□□□□ -0.94
SYNE2-209ENST00000553308 APOOQ9BUR5 198 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 TTYH3Q9C0H2 523 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 KLC2Q9H0B6 622 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 SLC25A18Q9H1K4 315 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 MAGEH1Q9H213 219 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 PDCL3Q9H2J4 239 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 METTL5Q9NRN9 209 aaKnown RBP9.17□□□□□ -0.94
SYNE2-209ENST00000553308 TMEM248Q9NWD8 314 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 ANKMY1Q9P2S6 941 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 OR12D3Q9UGF7 316 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 HPCAL4Q9UM19 191 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 RNF215Q9Y6U7 377 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 ANKRD36A6QL64 1941 aa9.17□□□□□ -0.94
SYNE2-209ENST00000553308 PTPN13Q12923 2485 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 GTPBP10A4D1E9 387 aaKnown RBP9.16□□□□□ -0.94
SYNE2-209ENST00000553308 TMEM110-MUSTN1A8MSY1 372 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 B4DGG1 531 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 BUB1O43683 1085 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 KDELR3O43731 214 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 LRIG2O94898 1065 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 PIGNO95427 931 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 IGSF6O95976 241 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 GLB1P16278 677 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 XPAP23025 273 aaPredicted RBP9.16□□□□□ -0.94
SYNE2-209ENST00000553308 HTR1BP28222 390 aa9.16□□□□□ -0.94
SYNE2-209ENST00000553308 ADRA1BP35368 520 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms