RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TARDBPQ13148 414 aaKnown RBP eCLIP11.55□□□□□ -0.564e-9■■■■■ 33.8
TMEM116-218ENST00000552839 ZNF235Q14590 738 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 RTP5Q14D33 572 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 PDK1Q15118 436 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 SHBQ15464 509 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 TIGD7Q6NT04 549 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-218ENST00000552839 PCSK4Q6UW60 755 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 CDKL3Q8IVW4 592 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-218ENST00000552839 UMODL1-AS1Q8N2C9 162 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.55□□□□□ -0.56
TMEM116-218ENST00000552839 ATP11CQ8NB49 1132 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 ARHGEF2Q92974 986 aaKnown RBP11.55□□□□□ -0.56
TMEM116-218ENST00000552839 CNDP2Q96KP4 475 aaKnown RBP11.55□□□□□ -0.56
TMEM116-218ENST00000552839 CCDC114Q96M63 670 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 WDR24Q96S15 920 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 OSBPL9Q96SU4 736 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 FEM1AQ9BSK4 669 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 NRSN2Q9GZP1 204 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 SGK2Q9HBY8 427 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 PRSS16Q9NQE7 514 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 ETNK2Q9NVF9 386 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 UBA2Q9UBT2 640 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-218ENST00000552839 SNX12Q9UMY4 172 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 NEU3Q9UQ49 428 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 TTLL3Q9Y4R7 772 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 SAR1BQ9Y6B6 198 aa11.55□□□□□ -0.56
TMEM116-218ENST00000552839 FLNBO75369 2602 aaKnown RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 A0A0D9SEW6 157 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 C3orf70A6NLC5 250 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 APOC4-APOC2K7ER74 178 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 VILLO15195 856 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 BNIP3LO60238 219 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 SNAP91O60641 907 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 ZNF189O75820 626 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 APOC2P02655 101 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 FGGP02679 453 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 WNT1P04628 370 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 DLDP09622 509 aaKnown RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 C1SP09871 688 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 ACVRL1P37023 503 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 ACADVLP49748 655 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 C21orf59P57076 290 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 ZBTB16Q05516 673 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 PAFAH1B3Q15102 231 aaKnown RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 HES3Q5TGS1 186 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 KIAA0895LQ68EN5 471 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 SLC9A4Q6AI14 798 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 AADACL2Q6P093 401 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 FBXL19Q6PCT2 694 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 BBS12Q6ZW61 710 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 GPR155Q7Z3F1 870 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 ADIPOR2Q86V24 386 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 SLC13A5Q86YT5 568 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 LRRC49Q8IUZ0 686 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 APCDD1Q8J025 514 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 RYBPQ8N488 228 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 NPWQ8N729 165 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 PQLC3Q8N755 202 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 SNIP1Q8TAD8 396 aaKnown RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 CAPZA3Q96KX2 299 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 SLC6A18Q96N87 628 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 ELF4Q99607 663 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 CINPQ9BW66 212 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 ACE2Q9BYF1 805 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 SLC39A8Q9C0K1 460 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 FBRSQ9HAH7 460 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 EBF2Q9HAK2 575 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 NDFIP2Q9NV92 336 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 IPO11Q9UI26 975 aaKnown RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 VPS51Q9UID3 782 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 EFR3BQ9Y2G0 817 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 MFHAS1Q9Y4C4 1052 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 FARP1Q9Y4F1 1045 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-218ENST00000552839 DOCK9Q9BZ29 2069 aa11.54□□□□□ -0.56
TMEM116-218ENST00000552839 ASH1LQ9NR48 2969 aaKnown RBP11.53□□□□□ -0.56
TMEM116-218ENST00000552839 TEX51A0A1B0GUA7 166 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 A0A1W2PPC4 97 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 FAM47DPA6NHR8 397 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 ITGAVP06756 1048 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 SRPRAP08240 638 aaKnown RBP11.53□□□□□ -0.56
TMEM116-218ENST00000552839 CDK4P11802 303 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 IL4RP24394 825 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 EIF3EP60228 445 aaKnown RBP11.53□□□□□ -0.56
TMEM116-218ENST00000552839 RHOAP61586 193 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 GBE1Q04446 702 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 SERINC3Q13530 473 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 TMCO4Q5TGY1 634 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 DARS2Q6PI48 645 aaKnown RBP11.53□□□□□ -0.56
TMEM116-218ENST00000552839 NPNTQ6UXI9 565 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 LINGO4Q6UY18 593 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 LEKR1Q6ZMV7 388 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 KIAA0907Q7Z7F0 614 aaPredicted RBP11.53□□□□□ -0.56
TMEM116-218ENST00000552839 ZC3H18Q86VM9 953 aaKnown RBP11.53□□□□□ -0.56
TMEM116-218ENST00000552839 EID2Q8N6I1 236 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 PLD5Q8N7P1 536 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 NETO2Q8NC67 525 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 KIF18AQ8NI77 898 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 SAP25Q8TEE9 199 aa11.53□□□□□ -0.56
TMEM116-218ENST00000552839 TFB1MQ8WVM0 346 aaKnown RBP11.53□□□□□ -0.56
TMEM116-218ENST00000552839 FGF11Q92914 225 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms