RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 CASP14P31944 242 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 GKP32189 559 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 PDX1P52945 283 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 SNRPD1P62314 119 aaKnown RBP12□□□□□ -0.49
CKAP4-202ENST00000552828 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
CKAP4-202ENST00000552828 POLD3Q15054 466 aaPredicted RBP12□□□□□ -0.49
CKAP4-202ENST00000552828 ARL13BQ3SXY8 428 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 C3orf38Q5JPI3 329 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 PERM1Q5SV97 790 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 C6orf132Q5T0Z8 1188 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 PPP1R2P3Q6NXS1 205 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 INO80CQ6PI98 192 aaPredicted RBP12□□□□□ -0.49
CKAP4-202ENST00000552828 CLEC14AQ86T13 490 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 PHF13Q86YI8 300 aaPredicted RBP12□□□□□ -0.49
CKAP4-202ENST00000552828 SLC35F3Q8IY50 421 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 CENPIQ92674 756 aaPredicted RBP12□□□□□ -0.49
CKAP4-202ENST00000552828 GLMNQ92990 594 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 NAT6Q93015 286 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 C11orf70Q9BRQ4 267 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 LRRC61Q9BV99 259 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 TCEAL2Q9H3H9 227 aaPredicted RBP12□□□□□ -0.49
CKAP4-202ENST00000552828 ADAM22Q9P0K1 906 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 ITM2BQ9Y287 266 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 MFHAS1Q9Y4C4 1052 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 COL27A1Q8IZC6 1860 aaPredicted RBP12□□□□□ -0.49
CKAP4-202ENST00000552828 COL6A6A6NMZ7 2263 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 FAM72CH0Y354 149 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 KRIT1O00522 736 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 NTN3O00634 580 aaPredicted RBP11.99□□□□□ -0.49
CKAP4-202ENST00000552828 MUSKO15146 869 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 YY2O15391 372 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 KDELR3O43731 214 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 SERPING1P05155 500 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 UGT2B4P06133 528 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 SKILP12757 684 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 IGFALSP35858 605 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 THOP1P52888 689 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 ADKP55263 362 aaKnown RBP11.99□□□□□ -0.49
CKAP4-202ENST00000552828 ATP11AP98196 1134 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 TSR1Q2NL82 804 aaKnown RBP11.99□□□□□ -0.49
CKAP4-202ENST00000552828 CCDC14Q49A88 953 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 RAB6CQ53S08 254 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 PRRT3Q5FWE3 981 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 FAM72AQ5TYM5 149 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 E4F1Q66K89 784 aaPredicted RBP11.99□□□□□ -0.49
CKAP4-202ENST00000552828 ACAD10Q6JQN1 1059 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 FAM72DQ6L9T8 149 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 LVRNQ6Q4G3 990 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 GDPD4Q6W3E5 623 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 MACC1Q6ZN28 852 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 ZNF571Q7Z3V5 609 aaPredicted RBP11.99□□□□□ -0.49
CKAP4-202ENST00000552828 TTC7BQ86TV6 843 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 VPS36Q86VN1 386 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 FAM72BQ86X60 149 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 PHACTR4Q8IZ21 702 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 RBFAQ8N0V3 343 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 ARL14Q8N4G2 192 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 EMC1Q8N766 993 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 OR6K2Q8NGY2 324 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 WDR36Q8NI36 951 aaKnown RBP11.99□□□□□ -0.49
CKAP4-202ENST00000552828 KLHL32Q96NJ5 620 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 SYT11Q9BT88 431 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 SLC13A1Q9BZW2 595 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 SEMA4CQ9C0C4 833 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 CLPBQ9H078 707 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 RAB6CQ9H0N0 254 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 DKK3Q9UBP4 350 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 APOBEC3BQ9UH17 382 aaKnown RBP11.99□□□□□ -0.49
CKAP4-202ENST00000552828 HPCAL4Q9UM19 191 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 MYO18BQ8IUG5 2567 aa11.99□□□□□ -0.49
CKAP4-202ENST00000552828 DOCK4Q8N1I0 1966 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 PMS2P1A4D2B8 440 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 ZSCAN5CA6NGD5 496 aaPredicted RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 C2CD4BA6NLJ0 364 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 B8ZZF3 427 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 MMP20O60882 483 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 RAMP2O60895 175 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 TM7SF2O76062 418 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 LRIG2O94898 1065 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 ITGA2BP08514 1039 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 PLEKP08567 350 aaPredicted RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 GZMAP12544 262 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 C6P13671 934 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 TIMP2P16035 220 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 TSHRP16473 764 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 SDC4P31431 198 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 EIF4A3P38919 411 aaKnown RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 PTPN9P43378 593 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 PEX5P50542 639 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 SUOXP51687 545 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 C15orf59Q2T9L4 293 aaPredicted RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 INO80DQ53TQ3 878 aaPredicted RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 TDRD12Q587J7 1177 aaKnown RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 RWDD4Q6NW29 188 aaKnown RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 STRADAQ7RTN6 431 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 SDR16C5Q8N3Y7 309 aa11.98□□□□□ -0.49
CKAP4-202ENST00000552828 FSTL5Q8N475 847 aaPredicted RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 RYBPQ8N488 228 aaPredicted RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 TP53I13Q8NBR0 393 aaPredicted RBP11.98□□□□□ -0.49
CKAP4-202ENST00000552828 OR8K1Q8NGG5 319 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms