RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 LRRTM2O43300 516 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 EIF5BO60841 1220 aaKnown RBP13.59□□□□□ -0.23
SNRPF-203ENST00000551316 CALCAP01258 141 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 TRIM21P19474 475 aaKnown RBP13.59□□□□□ -0.23
SNRPF-203ENST00000551316 BLKP51451 505 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 CCNHP51946 323 aaPredicted RBP13.59□□□□□ -0.23
SNRPF-203ENST00000551316 RAB15P59190 212 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 PPP3CAQ08209 521 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 CCDC15Q0P6D6 951 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 TRA2AQ13595 282 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNRPF-203ENST00000551316 KLHL40Q2TBA0 621 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 ANKRD40Q6AI12 368 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 CENPQQ7L2Z9 268 aaPredicted RBP13.59□□□□□ -0.23
SNRPF-203ENST00000551316 SEMA4DQ92854 862 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 EEF2KMTQ96G04 330 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 ZSWIM1Q9BR11 485 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 TWSG1Q9GZX9 223 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 DPEP2Q9H4A9 486 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 ZDHHC6Q9H6R6 413 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 SLAMF7Q9NQ25 335 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 TFIP11Q9UBB9 837 aaKnown RBP13.59□□□□□ -0.23
SNRPF-203ENST00000551316 LIMCH1Q9UPQ0 1083 aa13.59□□□□□ -0.23
SNRPF-203ENST00000551316 IGHV1OR21-1A0A087WYE8 117 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 A0A0D9SEW6 157 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 TMEM202A6NGA9 273 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 C16orf96A6NNT2 1141 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 A8MU76 341 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 AREL1O15033 823 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 TSPAN6O43657 245 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 KATNA1O75449 491 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 IGLV3-25P01717 112 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 STAT6P42226 847 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 GCLMP48507 274 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 MC2RQ01718 297 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 NNTQ13423 1086 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 WSCD2Q2TBF2 565 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 STXBP4Q6ZWJ1 553 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 ZNF761Q86XN6 746 aaPredicted RBP13.58□□□□□ -0.24
SNRPF-203ENST00000551316 CISD2Q8N5K1 135 aaKnown RBP13.58□□□□□ -0.24
SNRPF-203ENST00000551316 WRAP53Q9BUR4 548 aaKnown RBP13.58□□□□□ -0.24
SNRPF-203ENST00000551316 DMAC2Q9NW81 257 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 PHTF1Q9UMS5 762 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
SNRPF-203ENST00000551316 ST14Q9Y5Y6 855 aa13.58□□□□□ -0.24
SNRPF-203ENST00000551316 ZSCAN5CA6NGD5 496 aaPredicted RBP13.57□□□□□ -0.24
SNRPF-203ENST00000551316 O00370 1275 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 NEMP1O14524 444 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 PPM1DO15297 605 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 PRICKLE3O43900 615 aaPredicted RBP13.57□□□□□ -0.24
SNRPF-203ENST00000551316 NFKBIAP25963 317 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 ITGA1P56199 1179 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 RNASE9P60153 205 aaKnown RBP13.57□□□□□ -0.24
SNRPF-203ENST00000551316 RPS18P62269 152 aaKnown RBP13.57□□□□□ -0.24
SNRPF-203ENST00000551316 PTK2Q05397 1052 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 CDK18Q07002 472 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 ALFQ53S48 1182 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 SNAP47Q5SQN1 464 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 CDH24Q86UP0 819 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 NRROSQ86YC3 692 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 PLA2G15Q8NCC3 412 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 GALNT6Q8NCL4 622 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 INPP5DQ92835 1189 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 BTN2A3PQ96KV6 586 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 CCDC114Q96M63 670 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 RPRD1AQ96P16 312 aaPredicted RBP13.57□□□□□ -0.24
SNRPF-203ENST00000551316 TEFMQ96QE5 360 aaKnown RBP13.57□□□□□ -0.24
SNRPF-203ENST00000551316 NUDT9Q9BW91 350 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 TM6SF2Q9BZW4 377 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 MIS12Q9H081 205 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 MUC3BQ9H195 1237 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 MMRN2Q9H8L6 949 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 CCDC39Q9UFE4 941 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 VANGL2Q9ULK5 521 aa13.57□□□□□ -0.24
SNRPF-203ENST00000551316 FCF1Q9Y324 198 aaKnown RBP13.57□□□□□ -0.24
SNRPF-203ENST00000551316 PCDHGA9Q9Y5G4 932 aaKnown RBP13.57□□□□□ -0.24
SNRPF-203ENST00000551316 FN1P02751 2386 aaKnown RBP13.57□□□□□ -0.24
SNRPF-203ENST00000551316 FER1L5A0AVI2 2057 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 HEATR9A2RTY3 570 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 ARGFXA6NJG6 315 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 ECEL1O95672 775 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 APOEP02649 317 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 CCL11P51671 97 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 EIF4EBP2Q13542 120 aaPredicted RBP13.56□□□□□ -0.24
SNRPF-203ENST00000551316 IL10RAQ13651 578 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 PDILTQ8N807 584 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 OR7D4Q8NG98 312 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 PTCD2Q8WV60 388 aaKnown RBP13.56□□□□□ -0.24
SNRPF-203ENST00000551316 IRGQQ8WZA9 623 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 TFAP2BQ92481 460 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 PNPLA2Q96AD5 504 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 WDR92Q96MX6 357 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 APOOQ9BUR5 198 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 TBC1D30Q9Y2I9 924 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 PCDHB3Q9Y5E6 796 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 CLIC4Q9Y696 253 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 DGKBQ9Y6T7 804 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 RTTNQ86VV8 2226 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 COL6A5A8TX70 2615 aa13.56□□□□□ -0.24
SNRPF-203ENST00000551316 RHPN2P1A8MT19 583 aa13.55□□□□□ -0.24
SNRPF-203ENST00000551316 KCNU1A8MYU2 1149 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms