RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 SUDS3Q9H7L9 328 aaPredicted RBP19.85■□□□□ 0.77
SSH1-209ENST00000551165 EMCNQ9ULC0 261 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 TYK2P29597 1187 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 HOXA9P31269 272 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 CRHR1P34998 444 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 ASTLQ6HA08 431 aaPredicted RBP19.85■□□□□ 0.77
SSH1-209ENST00000551165 KIAA0930Q6ICG6 404 aaPredicted RBP19.85■□□□□ 0.77
SSH1-209ENST00000551165 ZC3HC1Q86WB0 502 aaKnown RBP19.85■□□□□ 0.77
SSH1-209ENST00000551165 ST13P5Q8NFI4 369 aaPredicted RBP19.85■□□□□ 0.77
SSH1-209ENST00000551165 NUDCD1Q96RS6 583 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 TDRD1Q9BXT4 1180 aaKnown RBP19.85■□□□□ 0.77
SSH1-209ENST00000551165 TM6SF2Q9BZW4 377 aa19.85■□□□□ 0.77
SSH1-209ENST00000551165 IQCGQ9H095 443 aaKnown RBP19.85■□□□□ 0.77
SSH1-209ENST00000551165 ANKRD36A6QL64 1941 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 HLA-DPA1P20036 260 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 CTSOP43234 321 aaPredicted RBP19.84■□□□□ 0.77
SSH1-209ENST00000551165 SERPINB4P48594 390 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 TRAF2Q12933 501 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 ZNF470Q6ECI4 717 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 LDB1Q86U70 411 aaPredicted RBP19.84■□□□□ 0.77
SSH1-209ENST00000551165 CNTN4Q8IWV2 1026 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 PLD6Q8N2A8 252 aaKnown RBP19.84■□□□□ 0.77
SSH1-209ENST00000551165 DCAF4L2Q8NA75 395 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 LRRC8CQ8TDW0 803 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 VPS11Q9H270 941 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 MKS1Q9NXB0 559 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 CDH22Q9UJ99 828 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 RAI2Q9Y5P3 530 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 EPOPA6NHQ4 379 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 XYLBO75191 536 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 NDST3O95803 873 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 EPOP01588 193 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 HNRNPA1P09651 372 aaKnown RBP eCLIP19.84■□□□□ 0.77
SSH1-209ENST00000551165 ALADP13716 330 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 SAT1P21673 171 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 SLC8A1P32418 973 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 IRF9Q00978 393 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 CES4AQ5XG92 561 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 NEPROQ6NW34 567 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 TMC5Q6UXY8 1006 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 VN1R2Q8NFZ6 395 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 OR13C4Q8NGS5 318 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 FIBINQ8TAL6 211 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 GDPD5Q8WTR4 605 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 PDCD6IPQ8WUM4 868 aaKnown RBP19.84■□□□□ 0.77
SSH1-209ENST00000551165 HDAC10Q969S8 669 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 LRRC3BQ96PB8 259 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 PBX4Q9BYU1 374 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 ABCB8Q9NUT2 735 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.84■□□□□ 0.77
SSH1-209ENST00000551165 UNC80Q8N2C7 3258 aa19.84■□□□□ 0.77
SSH1-209ENST00000551165 SNX3O60493 162 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 HAUS5O94927 633 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 FGF1P05230 155 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 PFKLP17858 780 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 BGNP21810 368 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 HLA-FP30511 346 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 GKP32189 559 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 MAGEA12P43365 314 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 RHOAP61586 193 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 ARHGAP15Q53QZ3 475 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 MPP7Q5T2T1 576 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 PTAR1Q7Z6K3 402 aaPredicted RBP19.83■□□□□ 0.77
SSH1-209ENST00000551165 ARID3BQ8IVW6 561 aaPredicted RBP19.83■□□□□ 0.77
SSH1-209ENST00000551165 RMDN1Q96DB5 314 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 DNAJC1Q96KC8 554 aaKnown RBP19.83■□□□□ 0.77
SSH1-209ENST00000551165 LMLNQ96KR4 655 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 RPL10LQ96L21 214 aaKnown RBP19.83■□□□□ 0.77
SSH1-209ENST00000551165 TBATAQ96M53 351 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 SLC39A10Q9ULF5 831 aa19.83■□□□□ 0.77
SSH1-209ENST00000551165 NRIP1P48552 1158 aa19.83■□□□□ 0.76
SSH1-209ENST00000551165 CSE1LP55060 971 aaKnown RBP19.83■□□□□ 0.76
SSH1-209ENST00000551165 THOC5Q13769 683 aaKnown RBP19.83■□□□□ 0.76
SSH1-209ENST00000551165 INO80DQ53TQ3 878 aaPredicted RBP19.83■□□□□ 0.76
SSH1-209ENST00000551165 NCEH1Q6PIU2 408 aa19.83■□□□□ 0.76
SSH1-209ENST00000551165 RGS9BPQ6ZS82 235 aa19.83■□□□□ 0.76
SSH1-209ENST00000551165 RTL10Q7L3V2 364 aa19.83■□□□□ 0.76
SSH1-209ENST00000551165 CACNA2D3Q8IZS8 1091 aa19.83■□□□□ 0.76
SSH1-209ENST00000551165 LPCAT1Q8NF37 534 aa19.83■□□□□ 0.76
SSH1-209ENST00000551165 MYLIPQ8WY64 445 aa19.83■□□□□ 0.76
SSH1-209ENST00000551165 PITPNM3Q9BZ71 974 aa19.83■□□□□ 0.76
SSH1-209ENST00000551165 FBXO6Q9NRD1 293 aaPredicted RBP19.83■□□□□ 0.76
SSH1-209ENST00000551165 MARCH4Q9P2E8 410 aaPredicted RBP19.83■□□□□ 0.76
SSH1-209ENST00000551165 PHTF1Q9UMS5 762 aa19.83■□□□□ 0.76
SSH1-209ENST00000551165 WNT6Q9Y6F9 365 aa19.83■□□□□ 0.76
SSH1-209ENST00000551165 NEDD8-MDP1E9PL57 170 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 TRIM24O15164 1050 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 GSRP00390 522 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 PAMP19021 973 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 STK19P49842 368 aaPredicted RBP19.82■□□□□ 0.76
SSH1-209ENST00000551165 PLEKHG6Q3KR16 790 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 N4BP2L1Q5TBK1 243 aaPredicted RBP19.82■□□□□ 0.76
SSH1-209ENST00000551165 RNF43Q68DV7 783 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 MDGA1Q8NFP4 955 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 OR6P1Q8NGX9 317 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 ISL2Q96A47 359 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 NKX2-4Q9H2Z4 354 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 TMEM216Q9P0N5 145 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 FBXO5Q9UKT4 447 aa19.82■□□□□ 0.76
SSH1-209ENST00000551165 RFXAPO00287 272 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms