RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 NPWQ8N729 165 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 CXorf40AQ8TE69 158 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 ISCUQ9H1K1 167 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 TCEAL2Q9H3H9 227 aaPredicted RBP13.57□□□□□ -0.24
GCN1-206ENST00000549815 SUV39H2Q9H5I1 410 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 USP29Q9HBJ7 922 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 DONSONQ9NYP3 566 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 ASXL3Q9C0F0 2248 aa13.57□□□□□ -0.24
GCN1-206ENST00000549815 LRP4O75096 1905 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 ARHGAP42A6NI28 874 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 TOR1BO14657 336 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
GCN1-206ENST00000549815 TPP1O14773 563 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 LZTS3O60299 673 aaPredicted RBP13.56□□□□□ -0.24
GCN1-206ENST00000549815 OPA1O60313 960 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 GCATO75600 419 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 SKILP12757 684 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 PBX1P40424 430 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 HCAR3P49019 387 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 KLHL30Q0D2K2 578 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 ELP6Q0PNE2 266 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 PTK2BQ14289 1009 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 GRM3Q14832 879 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 AGERQ15109 404 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 IRF4Q15306 451 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 UGP2Q16851 508 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 ZCCHC8Q6NZY4 707 aaKnown RBP13.56□□□□□ -0.24
GCN1-206ENST00000549815 TSEN2Q8NCE0 465 aaKnown RBP13.56□□□□□ -0.24
GCN1-206ENST00000549815 ZNF653Q96CK0 615 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 TBATAQ96M53 351 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 NSMCE3Q96MG7 304 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 ZNF641Q96N77 438 aaPredicted RBP13.56□□□□□ -0.24
GCN1-206ENST00000549815 WRAP53Q9BUR4 548 aaKnown RBP13.56□□□□□ -0.24
GCN1-206ENST00000549815 PCDH12Q9NPG4 1184 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 CWC15Q9P013 229 aaKnown RBP13.56□□□□□ -0.24
GCN1-206ENST00000549815 IPO11Q9UI26 975 aaKnown RBP13.56□□□□□ -0.24
GCN1-206ENST00000549815 SALL4Q9UJQ4 1053 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 PCDHB1Q9Y5F3 818 aa13.56□□□□□ -0.24
GCN1-206ENST00000549815 MUSKO15146 869 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 PRPSAP2O60256 369 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 RNF8O76064 485 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 C6P13671 934 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 IL1R2P27930 398 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 PCK1P35558 622 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 EIF4A3P38919 411 aaKnown RBP13.55□□□□□ -0.24
GCN1-206ENST00000549815 MMP12P39900 470 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 EIF2S3P41091 472 aaKnown RBP13.55□□□□□ -0.24
GCN1-206ENST00000549815 DUSP3P51452 185 aaPredicted RBP13.55□□□□□ -0.24
GCN1-206ENST00000549815 DPYSQ14117 519 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 WSCD2Q2TBF2 565 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 DEFB133Q30KQ1 61 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 BRAT1Q6PJG6 821 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 MACC1Q6ZN28 852 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 SRLQ86TD4 932 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 CAMK1DQ8IU85 385 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 TP53INP2Q8IXH6 220 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 PHACTR4Q8IZ21 702 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 LMX1AQ8TE12 382 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 BTN2A2Q8WVV5 523 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 ECHDC3Q96DC8 303 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 CRELD1Q96HD1 420 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 TUBGCP5Q96RT8 1024 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 NCAPGQ9BPX3 1015 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 LRRC61Q9BV99 259 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 BOCQ9BWV1 1114 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 C1QTNF7Q9BXJ2 289 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 CLPBQ9H078 707 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 SPASTQ9UBP0 616 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 APOBEC3BQ9UH17 382 aaKnown RBP13.55□□□□□ -0.24
GCN1-206ENST00000549815 COQ6Q9Y2Z9 468 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 AK5Q9Y6K8 562 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 SCINQ9Y6U3 715 aa13.55□□□□□ -0.24
GCN1-206ENST00000549815 A0A1W2PQJ5 194 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 EME2A4GXA9 379 aaPredicted RBP13.54□□□□□ -0.24
GCN1-206ENST00000549815 TRAFD1O14545 582 aaPredicted RBP13.54□□□□□ -0.24
GCN1-206ENST00000549815 PALMO75781 387 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 PEX11BO96011 259 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 PRKCGP05129 697 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 MYBL1P10243 752 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 TCF4P15884 667 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 ZNF135P52742 658 aaPredicted RBP13.54□□□□□ -0.24
GCN1-206ENST00000549815 THOP1P52888 689 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 SEMG2Q02383 582 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 IL10RBQ08334 325 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 NSUN2Q08J23 767 aaKnown RBP eCLIP13.54□□□□□ -0.24
GCN1-206ENST00000549815 RALGDSQ12967 914 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 C1orf61Q13536 156 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 RFTN1Q14699 578 aaPredicted RBP13.54□□□□□ -0.24
GCN1-206ENST00000549815 DPYSL2Q16555 572 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 PPP6R3Q5H9R7 873 aaPredicted RBP13.54□□□□□ -0.24
GCN1-206ENST00000549815 GUSBP11Q6P575 273 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 NYAP1Q6ZVC0 841 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 SNIP1Q8TAD8 396 aaKnown RBP13.54□□□□□ -0.24
GCN1-206ENST00000549815 IFI44Q8TCB0 444 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 TRIM11Q96F44 468 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 MRPL47Q9HD33 250 aaKnown RBP13.54□□□□□ -0.24
GCN1-206ENST00000549815 MYO1AQ9UBC5 1043 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 RP1P56715 2156 aa13.54□□□□□ -0.24
GCN1-206ENST00000549815 CFAP69A5D8W1 941 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms