RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 ZNF235Q14590 738 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 PDK2Q15119 407 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 UGP2Q16851 508 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 KANSL1Q7Z3B3 1105 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 DCP2Q8IU60 420 aaKnown RBP15.25■□□□□ 0.03
NR4A1-212ENST00000549102 SLC22A18ASQ8N1D0 253 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 EID2Q8N6I1 236 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 KCTD6Q8NC69 237 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 DENND6BQ8NEG7 585 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 WRAP53Q9BUR4 548 aaKnown RBP15.25■□□□□ 0.03
NR4A1-212ENST00000549102 PCDH12Q9NPG4 1184 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 KLHL11Q9NVR0 708 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 KLK13Q9UKR3 277 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 NEUROG3Q9Y4Z2 214 aa15.25■□□□□ 0.03
NR4A1-212ENST00000549102 PTPRBP23467 1997 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 SDC3O75056 442 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 TM7SF2O76062 418 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 PEX11BO96011 259 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 HSPA9P38646 679 aaKnown RBP15.24■□□□□ 0.03
NR4A1-212ENST00000549102 RABIFP47224 123 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 SCNN1BP51168 640 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 AP1S1P61966 158 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 BCL2L1Q07817 233 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 MESDQ14696 234 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 TMEM52BQ4KMG9 183 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 ERAP2Q6P179 960 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 ZSWIM9Q86XI8 627 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 MAP7D3Q8IWC1 876 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 RHOT2Q8IXI1 618 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 BBS5Q8N3I7 341 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 NSMCE1Q8WV22 266 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 ZNF670Q9BS34 389 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 C1QTNF7Q9BXJ2 289 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 GPR27Q9NS67 375 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 AKAP13Q12802 2813 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 FRYQ5TBA9 3013 aa15.24■□□□□ 0.03
NR4A1-212ENST00000549102 SPEGQ15772 3267 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
NR4A1-212ENST00000549102 MFSD11O43934 449 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 MTA2O94776 668 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 DKK1O94907 266 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 LDOC1O95751 146 aaPredicted RBP15.23■□□□□ 0.03
NR4A1-212ENST00000549102 ARHGAP25P42331 645 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 ANKRD20A8PQ5CZ79 823 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 ZFYVE27Q5T4F4 411 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 NCBP2-AS2Q69YL0 99 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 LRRC49Q8IUZ0 686 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 PAF1Q8N7H5 531 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 TC2NQ8N9U0 490 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 PCDH19Q8TAB3 1148 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 RFFLQ8WZ73 363 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 CENPTQ96BT3 561 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 ECHDC3Q96DC8 303 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 IFT43Q96FT9 208 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 CNDP2Q96KP4 475 aaKnown RBP15.23■□□□□ 0.03
NR4A1-212ENST00000549102 RBSNQ9H1K0 784 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 INTUQ9ULD6 942 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 ATP8A1Q9Y2Q0 1164 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 MSRB2Q9Y3D2 182 aa15.23■□□□□ 0.03
NR4A1-212ENST00000549102 SPTY2D1-AS1A0A0U1RR47 76 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.22■□□□□ 0.03
NR4A1-212ENST00000549102 TTC24A2A3L6 582 aaPredicted RBP15.22■□□□□ 0.03
NR4A1-212ENST00000549102 TRAFD1O14545 582 aaPredicted RBP15.22■□□□□ 0.03
NR4A1-212ENST00000549102 ENC1O14682 589 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 PRKCGP05129 697 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 CR2P20023 1033 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 IGFALSP35858 605 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 MMP12P39900 470 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 MMP13P45452 471 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 PFN3P60673 137 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 GALNT2Q10471 571 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 PDE1CQ14123 709 aaPredicted RBP15.22■□□□□ 0.03
NR4A1-212ENST00000549102 FZD2Q14332 565 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 PAFAH1B3Q15102 231 aaKnown RBP15.22■□□□□ 0.03
NR4A1-212ENST00000549102 CCDC157Q569K6 752 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 MARC1Q5VT66 337 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 UNQ6494/PRO21346Q6UXR6 183 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 KDM7AQ6ZMT4 941 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 PGBD5Q8N414 524 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 TP53I13Q8NBR0 393 aaPredicted RBP15.22■□□□□ 0.03
NR4A1-212ENST00000549102 FAF2Q96CS3 445 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 NSMCE3Q96MG7 304 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 NUDCD1Q96RS6 583 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 MGME1Q9BQP7 344 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 SCUBE2Q9NQ36 999 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 DNAJC28Q9NX36 388 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 COQ6Q9Y2Z9 468 aa15.22■□□□□ 0.03
NR4A1-212ENST00000549102 FAM221BA6H8Z2 402 aa15.21■□□□□ 0.03
NR4A1-212ENST00000549102 C1QTNF9BB2RNN3 333 aa15.21■□□□□ 0.03
NR4A1-212ENST00000549102 PIAS2O75928 621 aa15.21■□□□□ 0.03
NR4A1-212ENST00000549102 C1QTNF9P0C862 333 aa15.21■□□□□ 0.03
NR4A1-212ENST00000549102 C6P13671 934 aa15.21■□□□□ 0.03
NR4A1-212ENST00000549102 DGKAP23743 735 aa15.21■□□□□ 0.03
NR4A1-212ENST00000549102 KDELR1P24390 212 aa15.21■□□□□ 0.03
NR4A1-212ENST00000549102 GARSP41250 739 aaKnown RBP15.21■□□□□ 0.03
NR4A1-212ENST00000549102 LIG3P49916 1009 aa15.21■□□□□ 0.03
NR4A1-212ENST00000549102 ZNF75DP51815 510 aa15.21■□□□□ 0.03
NR4A1-212ENST00000549102 POLR2LP62875 67 aaKnown RBP15.21■□□□□ 0.03
NR4A1-212ENST00000549102 SEMG2Q02383 582 aa15.21■□□□□ 0.03
NR4A1-212ENST00000549102 IRF4Q15306 451 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms