RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 C1QTNF7Q9BXJ2 289 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 SLC13A1Q9BZW2 595 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 PLCB1Q9NQ66 1216 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 DKK3Q9UBP4 350 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 PISDQ9UG56 409 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 VPS4AQ9UN37 437 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 DOLKQ9UPQ8 538 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 FADS3Q9Y5Q0 445 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 SNX10Q9Y5X0 201 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 WASF2Q9Y6W5 498 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 PCNX1Q96RV3 2341 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 HIVEP3Q5T1R4 2406 aa8.6□□□□□ -1.03
TROAP-208ENST00000548817 DOCK4Q8N1I0 1966 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 HIVEP1P15822 2718 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 PRRC2CQ9Y520 2896 aaKnown RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 PRAMEF33A0A0G2JMD5 474 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 POM121BA6NF01 834 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 IGLON5A6NGN9 336 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 C16orf96A6NNT2 1141 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 STMND1H3BQB6 276 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 KRIT1O00522 736 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 MUSKO15146 869 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 PRAMEF10O60809 474 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 POP4O95707 220 aaKnown RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 ANXA6P08133 673 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 XPAP23025 273 aaPredicted RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 GABRB2P47870 512 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 SNRPD1P62314 119 aaKnown RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 APBA1Q02410 837 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 MAN2A1Q16706 1144 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 DEFB133Q30KQ1 61 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 LACTB2Q53H82 288 aaPredicted RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 FAXCQ5TGI0 409 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 TAF3Q5VWG9 929 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 ESRP1Q6NXG1 681 aaKnown RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 B3GNT8Q7Z7M8 397 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 HEATR4Q86WZ0 1026 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 ZFAND4Q86XD8 727 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 SLC35F3Q8IY50 421 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 FAM71AQ8IYT1 594 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 MLKLQ8NB16 471 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 DENND6BQ8NEG7 585 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 CXorf40AQ8TE69 158 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 ASB12Q8WXK4 309 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 NT5C3BQ969T7 300 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 ISG20Q96AZ6 181 aaKnown RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 GFM1Q96RP9 751 aaKnown RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 C1QTNF2Q9BXJ5 285 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 CDH19Q9H159 772 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 RETREG1Q9H6L5 497 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 SYNDIG1Q9H7V2 258 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 ZNF71Q9NQZ8 489 aaPredicted RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 KIAA1468Q9P260 1216 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 PPARGC1AQ9UBK2 798 aaKnown RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 FCF1Q9Y324 198 aaKnown RBP8.59□□□□□ -1.03
TROAP-208ENST00000548817 LOXL2Q9Y4K0 774 aa8.59□□□□□ -1.03
TROAP-208ENST00000548817 SPENQ96T58 3664 aaKnown RBP8.58□□□□□ -1.04
TROAP-208ENST00000548817 ABCA2Q9BZC7 2435 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 IGLV3-10A0A075B6K4 115 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 CXorf51AA0A1B0GTR3 108 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 A1L4Q6 167 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 ZNF891A8MT65 544 aaPredicted RBP8.58□□□□□ -1.04
TROAP-208ENST00000548817 LMO7DNF2Z398 122 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 TOR1BO14657 336 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 RAD51BO15315 384 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 GADD45BO75293 160 aaPredicted RBP8.58□□□□□ -1.04
TROAP-208ENST00000548817 LSM8O95777 96 aaKnown RBP8.58□□□□□ -1.04
TROAP-208ENST00000548817 GSRP00390 522 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 KRT7P08729 469 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 CTSEP14091 401 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 HGFP14210 728 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 CYP11B1P15538 503 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 TFE3P19532 575 aaPredicted RBP8.58□□□□□ -1.04
TROAP-208ENST00000548817 MAPKAPK2P49137 400 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 BLKP51451 505 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 ADKP55263 362 aaKnown RBP8.58□□□□□ -1.04
TROAP-208ENST00000548817 YPEL5P62699 121 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 ATP11AP98196 1134 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 FGL2Q14314 439 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 ESPL1Q14674 2120 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 DRAP1Q14919 205 aaPredicted RBP8.58□□□□□ -1.04
TROAP-208ENST00000548817 CAMK4Q16566 473 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 ZNF805Q5CZA5 627 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 PRRT3Q5FWE3 981 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 OTUD1Q5VV17 481 aaPredicted RBP8.58□□□□□ -1.04
TROAP-208ENST00000548817 PARS2Q7L3T8 475 aaKnown RBP8.58□□□□□ -1.04
TROAP-208ENST00000548817 TTC7BQ86TV6 843 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 VPS36Q86VN1 386 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 FAM131BQ86XD5 332 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 XYLT1Q86Y38 959 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 PLPP6Q8IY26 295 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 ZNF683Q8IZ20 524 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 SLC34A3Q8N130 599 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 EFCAB3Q8N7B9 438 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 OR6C4Q8NGE1 309 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 CMKLR1Q99788 373 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 OSBPL1AQ9BXW6 950 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 TM6SF2Q9BZW4 377 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 MAGEH1Q9H213 219 aa8.58□□□□□ -1.04
TROAP-208ENST00000548817 NDST4Q9H3R1 872 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms