RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SP110Q9HB58 689 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 MBD1Q9UIS9 605 aaPredicted RBP17.59■□□□□ 0.41
HDAC7-227ENST00000548080 THADAQ6YHU6 1953 aa17.59■□□□□ 0.41
HDAC7-227ENST00000548080 CCDC163A0A0D9SF12 145 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 PLK4O00444 970 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 ZNF821O75541 412 aaPredicted RBP17.58■□□□□ 0.41
HDAC7-227ENST00000548080 SASH3O75995 380 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 TMEM63AO94886 807 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 P2RY2P41231 377 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 IL10RBQ08334 325 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 MAP7D1Q3KQU3 841 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 ZNF776Q68DI1 518 aaPredicted RBP17.58■□□□□ 0.41
HDAC7-227ENST00000548080 PPP1R21Q6ZMI0 780 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 OR6K2Q8NGY2 324 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 PWWP2AQ96N64 755 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 FRMD8Q9BZ67 464 aaPredicted RBP17.58■□□□□ 0.41
HDAC7-227ENST00000548080 VIPAS39Q9H9C1 493 aa17.58■□□□□ 0.41
HDAC7-227ENST00000548080 SMG5Q9UPR3 1016 aaKnown RBP17.58■□□□□ 0.41
HDAC7-227ENST00000548080 ZFHX2Q9C0A1 2572 aaPredicted RBP17.58■□□□□ 0.4
HDAC7-227ENST00000548080 PLXND1Q9Y4D7 1925 aa17.58■□□□□ 0.4
HDAC7-227ENST00000548080 E7EVH7 732 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 GOLGA8MH3BSY2 632 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 MID1O15344 667 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 TMCC1O94876 653 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 PEX11BO96011 259 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 APRTP07741 180 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 ACADMP11310 421 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 TPSB2P20231 275 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 PSMB4P28070 264 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 PMS2P54278 862 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 ARL4CP56559 192 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 HNRNPDQ14103 355 aaKnown RBP17.57■□□□□ 0.4
HDAC7-227ENST00000548080 TPSAB1Q15661 275 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 SPDYCQ5MJ68 293 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 ATXN7L2Q5T6C5 722 aaPredicted RBP17.57■□□□□ 0.4
HDAC7-227ENST00000548080 CNTD1Q8N815 330 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 MCUQ8NE86 351 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 NSMCE1Q8WV22 266 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 AGAP3Q96P47 875 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 RBM15Q96T37 977 aaKnown RBP eCLIP17.57■□□□□ 0.4
HDAC7-227ENST00000548080 RSPH9Q9H1X1 276 aaPredicted RBP17.57■□□□□ 0.4
HDAC7-227ENST00000548080 GBA3Q9H227 469 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 RBM22Q9NW64 420 aaKnown RBP eCLIP17.57■□□□□ 0.44e-7■■■■■ 34.8
HDAC7-227ENST00000548080 SERGEFQ9UGK8 458 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 RSPH14Q9UHP6 348 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 SARDHQ9UL12 918 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 WDR87Q6ZQQ6 2873 aa17.57■□□□□ 0.4
HDAC7-227ENST00000548080 IGHV1OR15-9A0A0B4J2B8 117 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 PRAMEF11O60813 436 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 NEBLO76041 1014 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 IL1BP01584 269 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 CTSLP07711 333 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 GKP32189 559 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 CD68P34810 354 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 HSD17B3P37058 310 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 LMAN1P49257 510 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 VASPP50552 380 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 TPMTP51580 245 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 RENBPP51606 427 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 CDK16Q00536 496 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 CST6Q15828 149 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 DPY19L3Q6ZPD9 716 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 CENPUQ71F23 418 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 TRMT10CQ7L0Y3 403 aaKnown RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 ARMCX6Q7L4S7 300 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 ASCL5Q7RTU5 278 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 SUMF1Q8NBK3 374 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 OR2A12Q8NGT7 310 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 GRIN3AQ8TCU5 1115 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 GANCQ8TET4 914 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 UBLCP1Q8WVY7 318 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 OR8D1Q8WZ84 308 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 EXOC2Q96KP1 924 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 ZNF599Q96NL3 588 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 PHACTR1Q9C0D0 580 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 PDFQ9HBH1 243 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 EIF2B3Q9NR50 452 aaKnown RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 UBA2Q9UBT2 640 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 ARIH1Q9Y4X5 557 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 CEP192Q8TEP8 1941 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 F5H423 210 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 EIF3HO15372 352 aaKnown RBP eCLIP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 MAP3K13O43283 966 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 RNASEH1O60930 286 aaKnown RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 DNTTP04053 509 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 NFKB1P19838 968 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 PRPSAP1Q14558 356 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 ELAVL3Q14576 367 aaKnown RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 UAP1Q16222 522 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 HIF1AQ16665 826 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 SYCP2LQ5T4T6 812 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 CFAP58Q5T655 872 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 MARC1Q5VT66 337 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 ALS2CLQ60I27 953 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 RELL1Q8IUW5 271 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 TMEFF1Q8IYR6 380 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 PDIK1LQ8N165 341 aa17.56■□□□□ 0.4
HDAC7-227ENST00000548080 RYBPQ8N488 228 aaPredicted RBP17.56■□□□□ 0.4
HDAC7-227ENST00000548080 TEX26Q8N6G2 289 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms