RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 DYNLT1P63172 113 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 KIF5AQ12840 1032 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 LLGL1Q15334 1064 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 SLC45A4Q5BKX6 768 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 NPNTQ6UXI9 565 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 SPOCD1Q6ZMY3 1216 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 RCOR2Q8IZ40 523 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 TXLNBQ8N3L3 684 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 LRRC57Q8N9N7 239 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 MFSD2AQ8NA29 543 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 TMEM145Q8NBT3 493 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 CCNYQ8ND76 341 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 KIAA1524Q8TCG1 905 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 ECHDC3Q96DC8 303 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 LGMNQ99538 433 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 MYOCQ99972 504 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 C1QTNF2Q9BXJ5 285 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 NOD2Q9HC29 1040 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 NT5MQ9NPB1 228 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 FZD3Q9NPG1 666 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 SCUBE2Q9NQ36 999 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 TRIM10Q9UDY6 481 aa18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 FNDC3AQ9Y2H6 1198 aaKnown RBP18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.9■□□□□ 0.62
PRPF40B-206ENST00000547764 CNOT1A5YKK6 2376 aaKnown RBP18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 MACROD2A1Z1Q3 448 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 GRID2IPA4D2P6 1211 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 TLR4O00206 839 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 CCNB1P14635 433 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 HNRNPA2B1P22626 353 aaKnown RBP18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 AKT2P31751 481 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 ZSCAN30Q86W11 494 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 CCDC13Q8IYE1 715 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 EXD1Q8NHP7 514 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 GRPEL1Q9HAV7 217 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 PCDH12Q9NPG4 1184 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 RBM22Q9NW64 420 aaKnown RBP eCLIP18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 PCDHGC4Q9Y5F7 938 aa18.89■□□□□ 0.61
PRPF40B-206ENST00000547764 ANKRD36A6QL64 1941 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 CST8O60676 142 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 MMP20O60882 483 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 PRKCGP05129 697 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 CD59P13987 128 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 CTNNA1P35221 906 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 PPIDQ08752 370 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 ITKQ08881 620 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 ELP6Q0PNE2 266 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 SGCGQ13326 291 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 SLC14A1Q13336 389 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 TFDP2Q14188 446 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 PDK1Q15118 436 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 ZNF423Q2M1K9 1284 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 TMEM52BQ4KMG9 183 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 TFDP3Q5H9I0 405 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 RALGPS1Q5JS13 557 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 KAZNQ674X7 775 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 IQCHQ86VS3 1027 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 PAF1Q8N7H5 531 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 CXorf40AQ8TE69 158 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 RBM41Q96IZ5 413 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 OLFM3Q96PB7 478 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 WRAP53Q9BUR4 548 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 POLR1EQ9GZS1 481 aaKnown RBP18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 PCDHA3Q9Y5H8 950 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 ADGRG1Q9Y653 693 aa18.88■□□□□ 0.61
PRPF40B-206ENST00000547764 hCG_1818297A0A087WSY0 165 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 H0Y8X5 98 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 RIOK3O14730 519 aaKnown RBP18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 RAD51BO15315 384 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 ARHGAP6O43182 974 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 HTRA2O43464 458 aaPredicted RBP18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 SOCS5O75159 536 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 ZNF883P0CG24 379 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 CLDN2P57739 230 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 NXPH1P58417 271 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 POLR2LP62875 67 aaKnown RBP18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 SEMG2Q02383 582 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 ADCY2Q08462 1091 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 OVGP1Q12889 678 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 TRAF2Q12933 501 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 PRAMEF14Q5SWL7 426 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 ERAP2Q6P179 960 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 ERMP1Q7Z2K6 904 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 SPATS2Q86XZ4 545 aaKnown RBP18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 CCDC50Q8IVM0 306 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 LRRC8AQ8IWT6 810 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 CCDC112Q8NEF3 446 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 ASB12Q8WXK4 309 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 KLHDC7BQ96G42 594 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 KLF6Q99612 283 aaPredicted RBP18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 SEMA3CQ99985 751 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 GDF3Q9NR23 364 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 TM7SF3Q9NS93 570 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 SAE1Q9UBE0 346 aaPredicted RBP18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 AMACRQ9UHK6 382 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 ATP8A1Q9Y2Q0 1164 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 HS3ST3A1Q9Y663 406 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 CABIN1Q9Y6J0 2220 aa18.87■□□□□ 0.61
PRPF40B-206ENST00000547764 TMEM131Q92545 1883 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms