RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.95□□□□□ -1.14
UBR1-202ENST00000546274 ATP13A3Q9H7F0 1226 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 RSAD1Q9HA92 442 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 RRAGCQ9HB90 399 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.95□□□□□ -1.14
UBR1-202ENST00000546274 MAT2BQ9NZL9 334 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 PPME1Q9Y570 386 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 C12orf71A8MTZ7 269 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 A8MV72 311 aaPredicted RBP7.95□□□□□ -1.14
UBR1-202ENST00000546274 MED7O43513 233 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 CILPO75339 1184 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 C8BP07358 591 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 NFICP08651 508 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 CCDC159P0C7I6 412 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 CXCL8P10145 99 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 IFI30P13284 250 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 CKMT2P17540 419 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 MATN1P21941 496 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 EDNRBP24530 442 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 DCKP27707 260 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 SERPINB5P36952 375 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 SEPHS1P49903 392 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 ZNF143P52747 638 aaPredicted RBP7.95□□□□□ -1.14
UBR1-202ENST00000546274 VAC14Q08AM6 782 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 IKBKEQ14164 716 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 INSCQ1MX18 579 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 KIZQ2M2Z5 673 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 MPZL3Q6UWV2 235 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 PLD5Q8N7P1 536 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 ATP6V1E2Q96A05 226 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 TP53INP1Q96A56 240 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 VPS33AQ96AX1 596 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 NLRP4Q96MN2 994 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 RAD21L1Q9H4I0 556 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 ITM2CQ9NQX7 267 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 NRBP2Q9NSY0 501 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 SEPT10Q9P0V9 454 aa7.95□□□□□ -1.14
UBR1-202ENST00000546274 SOWAHBA6NEL2 793 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ZBBXA8MT70 800 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 POLR1CO15160 346 aaPredicted RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 MTSS1O43312 755 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 DAB1O75553 588 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 GSTM1P09488 218 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 PRKCHP24723 683 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ATP6V0D1P61421 351 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 MS4A2Q01362 244 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 PTPN11Q06124 597 aaPredicted RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 GNA13Q14344 377 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 MTX3Q5HYI7 312 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 SMYD5Q6GMV2 418 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 DARS2Q6PI48 645 aaKnown RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 USP50Q70EL3 339 aaPredicted RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 ZNF534Q76KX8 674 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 SLC26A11Q86WA9 606 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 CCDC103Q8IW40 242 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 PQLC3Q8N755 202 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 NAT16Q8N8M0 369 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ZNF420Q8TAQ5 688 aaPredicted RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 LRTOMTQ8WZ04 291 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 HERVK_113Q902F9 699 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 CMTM5Q96DZ9 223 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ZNF560Q96MR9 790 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ACAT2Q9BWD1 397 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 FZD8Q9H461 694 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 MINDY3Q9H8M7 445 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 PLSCR3Q9NRY6 295 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 WARS2Q9UGM6 360 aaKnown RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 PLLPQ9Y342 182 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 BPTFQ12830 3046 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 CITO14578 2027 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 C2CD4BA6NLJ0 364 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 TRIM49D1C9J1S8 452 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 C19orf81C9J6K1 198 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 STX16-NPEPL1H3BU86 382 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 INO80B-WBP1J3KQ70 363 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 DYRK3O43781 588 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ARIH2O95376 493 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 PFKMP08237 780 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 INHBAP08476 426 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 CD1EP15812 388 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 MAGEA3P43357 314 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 MAGEA6P43360 314 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 PTPN9P43378 593 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 GPLD1P80108 840 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 HSPA14Q0VDF9 509 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 GALNT2Q10471 571 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 SPCS2Q15005 226 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 SURF1Q15526 300 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 LY6KQ17RY6 165 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 PAGE2BQ5JRK9 111 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ANGEL2Q5VTE6 544 aaKnown RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 TTC39BQ5VTQ0 682 aaPredicted RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 IER5Q5VY09 327 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 MAP1SQ66K74 1059 aaPredicted RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 PPP4R4Q6NUP7 873 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 FKBP9P1Q75LS8 142 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 MICALL2Q8IY33 904 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 OR2T3Q8NH03 318 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ANGPTL6Q8NI99 470 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms