RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 PDCL3Q9H2J4 239 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 EVA1BQ9NVM1 165 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 TAB2Q9NYJ8 693 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 ACSL6Q9UKU0 697 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 HECTD1Q9ULT8 2610 aa12.7□□□□□ -0.38
COPS7A-221ENST00000546229 A0A1W2PQM1 296 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 ZSCAN5CA6NGD5 496 aaPredicted RBP12.69□□□□□ -0.38
COPS7A-221ENST00000546229 CYSRT1A8MQ03 144 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 D6RAR5 112 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 CCP110O43303 1012 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 NOBOXO60393 691 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 TM7SF2O76062 418 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 PIGNO95427 931 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 ITGA2BP08514 1039 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 SOX5P35711 763 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 EIF4A3P38919 411 aaKnown RBP12.69□□□□□ -0.38
COPS7A-221ENST00000546229 SERINC3Q13530 473 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 LY6DQ14210 128 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 CYTH1Q15438 398 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 CLEC16AQ2KHT3 1053 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 WDR59Q6PJI9 974 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 PHF13Q86YI8 300 aaPredicted RBP12.69□□□□□ -0.38
COPS7A-221ENST00000546229 UMODL1-AS1Q8N2C9 162 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 ARL10Q8N8L6 244 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 C3orf20Q8ND61 904 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 PCDH19Q8TAB3 1148 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 CASKIN2Q8WXE0 1202 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 NSMCE3Q96MG7 304 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 IL12RB2Q99665 862 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 SYT11Q9BT88 431 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 WRAP53Q9BUR4 548 aaKnown RBP12.69□□□□□ -0.38
COPS7A-221ENST00000546229 CPEB1Q9BZB8 566 aaKnown RBP12.69□□□□□ -0.38
COPS7A-221ENST00000546229 ABCG4Q9H172 646 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 LRRC19Q9H756 370 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 COQ6Q9Y2Z9 468 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 COL12A1Q99715 3063 aa12.69□□□□□ -0.38
COPS7A-221ENST00000546229 RELNP78509 3460 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 CCDC187A0A096LP49 1063 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 RASA4BC9J798 803 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 RASA4O43374 803 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 BUB1BO60566 1050 aaPredicted RBP12.68□□□□□ -0.38
COPS7A-221ENST00000546229 C6P13671 934 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 RGRP47804 291 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 PEX5P50542 639 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 HK3P52790 923 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 THOP1P52888 689 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 OGDHQ02218 1023 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 RALGDSQ12967 914 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 PTK2BQ14289 1009 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 KRT31Q15323 416 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 TPD52L1Q16890 204 aaPredicted RBP12.68□□□□□ -0.38
COPS7A-221ENST00000546229 ARL13BQ3SXY8 428 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 BROXQ5VW32 411 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 TRIM72Q6ZMU5 477 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 CYP4V2Q6ZWL3 525 aaPredicted RBP12.68□□□□□ -0.38
COPS7A-221ENST00000546229 APTXQ7Z2E3 356 aaKnown RBP12.68□□□□□ -0.38
COPS7A-221ENST00000546229 ZNF605Q86T29 641 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 SFTPA2Q8IWL1 248 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 RYBPQ8N488 228 aaPredicted RBP12.68□□□□□ -0.38
COPS7A-221ENST00000546229 GPR156Q8NFN8 814 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 WDR36Q8NI36 951 aaKnown RBP12.68□□□□□ -0.38
COPS7A-221ENST00000546229 WDR48Q8TAF3 677 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 CCDC74AQ96AQ1 378 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 PDXPQ96GD0 296 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 EXOC2Q96KP1 924 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 IPO11Q9UI26 975 aaKnown RBP12.68□□□□□ -0.38
COPS7A-221ENST00000546229 FZD10Q9ULW2 581 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 PADI4Q9UM07 663 aa12.68□□□□□ -0.38
COPS7A-221ENST00000546229 PTPN13Q12923 2485 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 NEMP1O14524 444 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 BUB1O43683 1085 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 IGSF6O95976 241 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 GPD1P21695 349 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 CCKBRP32239 447 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 YBEYP58557 167 aaPredicted RBP12.67□□□□□ -0.38
COPS7A-221ENST00000546229 POLR2FP61218 127 aaKnown RBP12.67□□□□□ -0.38
COPS7A-221ENST00000546229 RPL7AP62424 266 aaKnown RBP12.67□□□□□ -0.38
COPS7A-221ENST00000546229 PPARDQ03181 441 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 SRSF6Q13247 344 aaKnown RBP12.67□□□□□ -0.38
COPS7A-221ENST00000546229 NFATC4Q14934 902 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 PARP15Q460N3 678 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 KIAA1614Q5VZ46 1190 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 AFMIDQ63HM1 303 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 LVRNQ6Q4G3 990 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 TMPRSS9Q7Z410 1059 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 TTC7BQ86TV6 843 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 PELI3Q8N2H9 469 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 FSTL5Q8N475 847 aaPredicted RBP12.67□□□□□ -0.38
COPS7A-221ENST00000546229 PLA2G15Q8NCC3 412 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 HCAR2Q8TDS4 363 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 CXorf40AQ8TE69 158 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 TSACCQ96A04 125 aaPredicted RBP12.67□□□□□ -0.38
COPS7A-221ENST00000546229 ECHDC3Q96DC8 303 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 RBM15Q96T37 977 aaKnown RBP eCLIP12.67□□□□□ -0.38
COPS7A-221ENST00000546229 EDEM3Q9BZQ6 932 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 SLC13A1Q9BZW2 595 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 PCDH12Q9NPG4 1184 aa12.67□□□□□ -0.38
COPS7A-221ENST00000546229 FAM207AQ9NSI2 230 aaPredicted RBP12.67□□□□□ -0.38
COPS7A-221ENST00000546229 ATXN7L1Q9ULK2 861 aaPredicted RBP12.67□□□□□ -0.38
COPS7A-221ENST00000546229 PCDHGA7Q9Y5G6 932 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms