RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 RRN3Q9NYV6 651 aa15.93■□□□□ 0.14
LDLR-204ENST00000545707 C7orf72A4D263 438 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 TRPC5OSA6NMA1 111 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 HAS3O00219 553 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 TRIM38O00635 465 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 PSMD3O43242 534 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 RPL5P46777 297 aaKnown RBP15.92■□□□□ 0.14
LDLR-204ENST00000545707 HK2P52789 917 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 NME5P56597 212 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 DYNC1I2Q13409 638 aaKnown RBP15.92■□□□□ 0.14
LDLR-204ENST00000545707 C9orf131Q5VYM1 1079 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 RANBP10Q6VN20 620 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 CUZD1Q86UP6 607 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 FAM110BQ8TC76 370 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 EME1Q96AY2 570 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 CSNK1G1Q9HCP0 422 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 SLC4A7Q9Y6M7 1214 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 SMIM31A0A1B0GVY4 71 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 PRORSD1PA6NEY8 169 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 OR51F1A6NGY5 319 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 AP3B1O00203 1094 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 B3GAT3O94766 335 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 ADSLP30566 484 aaPredicted RBP15.92■□□□□ 0.14
LDLR-204ENST00000545707 GEMP55040 296 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 WNT3AP56704 352 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 ITKQ08881 620 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 FASTKQ14296 549 aaKnown RBP15.92■□□□□ 0.14
LDLR-204ENST00000545707 MYLK3Q32MK0 819 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 MGAT5BQ3V5L5 792 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 TECRLQ5HYJ1 363 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 POTEHQ6S545 545 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 AGMOQ6ZNB7 445 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 AMIGO2Q86SJ2 522 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 KLHDC8BQ8IXV7 354 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 LPGAT1Q92604 370 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 DGCR14Q96DF8 476 aaKnown RBP15.92■□□□□ 0.14
LDLR-204ENST00000545707 KLHL5Q96PQ7 755 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 TSPAN18Q96SJ8 248 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 PTPN18Q99952 460 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 COQ10BQ9H8M1 238 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 CACNA2D2Q9NY47 1150 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 CPA4Q9UI42 421 aa15.92■□□□□ 0.14
LDLR-204ENST00000545707 PSMD12O00232 456 aaPredicted RBP15.91■□□□□ 0.14
LDLR-204ENST00000545707 UBFD1O14562 309 aaKnown RBP15.91■□□□□ 0.14
LDLR-204ENST00000545707 UBDO15205 165 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 ZNF189O75820 626 aaPredicted RBP15.91■□□□□ 0.14
LDLR-204ENST00000545707 RPL26P61254 145 aaKnown RBP15.91■□□□□ 0.14
LDLR-204ENST00000545707 CACNB2Q08289 660 aaPredicted RBP15.91■□□□□ 0.14
LDLR-204ENST00000545707 TRIM25Q14258 630 aaKnown RBP15.91■□□□□ 0.14
LDLR-204ENST00000545707 RFTN1Q14699 578 aaPredicted RBP15.91■□□□□ 0.14
LDLR-204ENST00000545707 CYTH1Q15438 398 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 ARTNQ5T4W7 220 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 REP15Q6BDI9 236 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 KLHDC10Q6PID8 442 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 TFAP2DQ7Z6R9 452 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 OR10T2Q8NGX3 314 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 ZFP28Q8NHY6 868 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 GRIN3AQ8TCU5 1115 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 EXT2Q93063 718 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 ENTPD7Q9NQZ7 604 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 SLC38A7Q9NVC3 462 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 GIMAP2Q9UG22 337 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 BCAP29Q9UHQ4 241 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 AP4S1Q9Y587 144 aa15.91■□□□□ 0.14
LDLR-204ENST00000545707 IRAK2O43187 625 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 GPC4O75487 556 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 IPO13O94829 963 aaKnown RBP15.9■□□□□ 0.14
LDLR-204ENST00000545707 ZNF865P0CJ78 1059 aaPredicted RBP15.9■□□□□ 0.14
LDLR-204ENST00000545707 ZNF26P17031 533 aaPredicted RBP15.9■□□□□ 0.14
LDLR-204ENST00000545707 PCSK1P29120 753 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 POU4F1Q01851 419 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 LRP8Q14114 963 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 IHHQ14623 411 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 FAM83EQ2M2I3 478 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 TMEM207Q6UWW9 146 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 PIM3Q86V86 326 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 LCA5Q86VQ0 697 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 ALG9Q9H6U8 611 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 DDX18Q9NVP1 670 aaKnown RBP15.9■□□□□ 0.14
LDLR-204ENST00000545707 SNX13Q9Y5W8 968 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 TTC3P53804 2025 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 A0A087X1B8 175 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 UNCXA6NJT0 531 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 C9JVG2 144 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 PPP6CO00743 305 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 FAM58BPP0C7Q3 252 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 HSPA1AP0DMV8 641 aaKnown RBP15.9■□□□□ 0.14
LDLR-204ENST00000545707 HSPA1BP0DMV9 641 aaKnown RBP15.9■□□□□ 0.14
LDLR-204ENST00000545707 DNAJB2P25686 324 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 CDH13P55290 713 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 UPP1Q16831 310 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 GPR158Q5T848 1215 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 OR6P1Q8NGX9 317 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 DLG3Q92796 817 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 SLCO4A1Q96BD0 722 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 ASB9Q96DX5 294 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 LRCH3Q96II8 777 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 SLC29A1Q99808 456 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 NT5MQ9NPB1 228 aa15.9■□□□□ 0.14
LDLR-204ENST00000545707 IPO11Q9UI26 975 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms