RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 PRKG2Q13237 762 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 PLCL1Q15111 1095 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 USP39Q53GS9 565 aaKnown RBP12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SH3BP5LQ7L8J4 393 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 CCDC3Q9BQI4 270 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SDCBP2Q9H190 292 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 HMX1Q9NP08 348 aaPredicted RBP12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SMPD4Q9NXE4 827 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 PEAK1Q9H792 1746 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 DUOX1Q9NRD9 1551 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 FAM47E-STBD1D6RA91 191 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 ULK1O75385 1050 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 CCNA2P20248 432 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 C16orf72Q14CZ0 275 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SKIV2LQ15477 1246 aaKnown RBP12.6□□□□□ -0.39
COL4A6-209ENST00000545689 MAPKAPK3Q16644 382 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 RNASEH2BQ5TBB1 312 aaKnown RBP12.6□□□□□ -0.39
COL4A6-209ENST00000545689 TRIQKQ629K1 86 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 NAIF1Q69YI7 327 aaPredicted RBP12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SLC26A9Q7LBE3 791 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 ALYREFQ86V81 257 aaKnown RBP12.6□□□□□ -0.39
COL4A6-209ENST00000545689 DEPDC4Q8N2C3 294 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 ZFP28Q8NHY6 868 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 CPT1BQ92523 772 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 USP7Q93009 1102 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 KLRG1Q96E93 195 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 PWWP2AQ96N64 755 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SPATA5L1Q9BVQ7 753 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 GRIP2Q9C0E4 1043 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 OSGEPL1Q9H4B0 414 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SLC17A7Q9P2U7 560 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 MAGEL2Q9UJ55 1249 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 C1orf232A0A0U1RR37 186 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 ENTPD5O75356 428 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 PCDH8O95206 1070 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 ACADMP11310 421 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 QPCTQ16769 361 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 PARP15Q460N3 678 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 CYP20A1Q6UW02 462 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 ADCY4Q8NFM4 1077 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 EIF2B3Q9NR50 452 aaKnown RBP12.6□□□□□ -0.39
COL4A6-209ENST00000545689 ANGPT4Q9Y264 503 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 VWA7Q9Y334 891 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 LTN1O94822 1766 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 ASNA1O43681 348 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 ADSLP30566 484 aaPredicted RBP12.6□□□□□ -0.39
COL4A6-209ENST00000545689 GRM3Q14832 879 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 TEX44Q53QW1 395 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 MYDGFQ969H8 173 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 Q96MT0 163 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 NFKBIZQ9BYH8 718 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 EPB41L4BQ9H329 900 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SERHL2Q9H4I8 314 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SERHLQ9NQF3 203 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 ENTPD4Q9Y227 616 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 PDE9AO76083 593 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 PWP1Q13610 501 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 DUSP28Q4G0W2 176 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SPANXN2Q5MJ10 180 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 DEFB128Q7Z7B8 93 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SFRP1Q8N474 314 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 RCN3Q96D15 328 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 TEKT5Q96M29 485 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 CPXM1Q96SM3 734 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 HSD3B7Q9H2F3 369 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 SLCO1B3Q9NPD5 702 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 EFCAB10A6NFE3 127 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 FAM25AB3EWG3 89 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 FAM25CB3EWG5 89 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 FAM25GB3EWG6 89 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ADRA1BP35368 520 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 IKBKEQ14164 716 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 PDZK1Q5T2W1 519 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 TYW3Q6IPR3 259 aaKnown RBP12.59□□□□□ -0.39
COL4A6-209ENST00000545689 TTC7BQ86TV6 843 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 RHOBTB2Q9BYZ6 727 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 GBA3Q9H227 469 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 CCNB1IP1Q9NPC3 277 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 R3HDM2Q9Y2K5 976 aaKnown RBP12.59□□□□□ -0.39
COL4A6-209ENST00000545689 LRCH4O75427 683 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 HGFP14210 728 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 PAICSP22234 425 aaKnown RBP12.59□□□□□ -0.39
COL4A6-209ENST00000545689 TRIM71Q2Q1W2 868 aaKnown RBP12.59□□□□□ -0.39
COL4A6-209ENST00000545689 CLNKQ7Z7G1 428 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 TCAIMQ8N3R3 496 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ITCHQ96J02 903 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ROGDIQ9GZN7 287 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 PCDHAC2Q9Y5I4 1007 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 PLD5Q8N7P1 536 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 KCTD15Q96SI1 283 aaPredicted RBP12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ST3GAL5Q9UNP4 418 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 GSTT1P30711 240 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ABCG1P45844 678 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 PTPRNQ16849 979 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 FGD3Q5JSP0 725 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 ANXA8L1Q5VT79 327 aa12.59□□□□□ -0.39
COL4A6-209ENST00000545689 R3HCC1LQ7Z5L2 792 aaKnown RBP12.59□□□□□ -0.39
COL4A6-209ENST00000545689 RBFAQ8N0V3 343 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms