RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 ABHD18Q0P651 414 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 CRTC2Q53ET0 693 aaPredicted RBP15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 ALFQ53S48 1182 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 CARD16Q5EG05 197 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 ZSCAN30Q86W11 494 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 BMPERQ8N8U9 685 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 OR1E3Q8WZA6 343 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 VOPP1Q96AW1 172 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 WRAP53Q9BUR4 548 aaKnown RBP15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 TRIM55Q9BYV6 548 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 RAB20Q9NX57 234 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 MAP10Q9P2G4 905 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 KLQ9UEF7 1012 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 SLC12A6Q9UHW9 1150 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 ATP6V1DQ9Y5K8 247 aa15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 OAS3Q9Y6K5 1087 aaKnown RBP15.56■□□□□ 0.08
CLSTN3-216ENST00000545663 M0QYV0 167 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 PDXKO00764 312 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 AREL1O15033 823 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 CLDN11O75508 207 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 TNFP01375 233 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 RHOCP08134 193 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 CSF2RBP32927 897 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 PEX5P50542 639 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 CLCN6P51797 869 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 INPP5AQ14642 412 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 NFATC4Q14934 902 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 TAF5Q15542 800 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 WSCD2Q2TBF2 565 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 KRT39Q6A163 491 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 IRF2BP1Q8IU81 584 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 GRAMD1CQ8IYS0 662 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 TTC13Q8NBP0 860 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 OR7D4Q8NG98 312 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 RAB7BQ96AH8 199 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 C19orf60Q96EN9 201 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 FAXDC2Q96IV6 333 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 C5orf34Q96MH7 638 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 TMEM168Q9H0V1 697 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 CUEDC2Q9H467 287 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 APMAPQ9HDC9 416 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 MRPL40Q9NQ50 206 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 SPATS2LQ9NUQ6 558 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 SLC5A6Q9Y289 635 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 COQ6Q9Y2Z9 468 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 FCF1Q9Y324 198 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 HS3ST4Q9Y661 456 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 LRP4O75096 1905 aa15.55■□□□□ 0.08
CLSTN3-216ENST00000545663 B4E171 279 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 TOR1BO14657 336 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 KRT86O43790 486 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 TM7SF2O76062 418 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 STK17BO94768 372 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 TSPAN7P41732 249 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 STAT5AP42229 794 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 PMS2P54278 862 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 CUL2Q13617 745 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 SLC39A14Q15043 492 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 INTS8Q75QN2 995 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 XYLT1Q86Y38 959 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 FAM186BQ8IYM0 893 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 FBXL13Q8NEE6 735 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 OR4D9Q8NGE8 314 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 HSFY1Q96LI6 401 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 USP28Q96RU2 1077 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 APOOQ9BUR5 198 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 TM6SF2Q9BZW4 377 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 HECAQ9UBI9 543 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 MTMR6Q9Y217 621 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 SNX10Q9Y5X0 201 aa15.54■□□□□ 0.08
CLSTN3-216ENST00000545663 PVALEFA0A1B0GWK0 134 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 TMEM202A6NGA9 273 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 TMEM110-MUSTN1A8MSY1 372 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 RHPN2P1A8MT19 583 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 RNF225M0QZC1 329 aaPredicted RBP15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 ADCY5O95622 1261 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 ZSCAN22P10073 491 aaPredicted RBP15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 THRAP10827 490 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 BRD2P25440 801 aaKnown RBP15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 HTR1BP28222 390 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 CDH4P55283 916 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 TRA2AQ13595 282 aaKnown RBP eCLIP15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 NR6A1Q15406 480 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 ZNF805Q5CZA5 627 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 SP5Q6BEB4 398 aaPredicted RBP15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 ATL3Q6DD88 541 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 ZNF438Q7Z4V0 828 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 RYBPQ8N488 228 aaPredicted RBP15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 UBR7Q8N806 425 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 IQUBQ8NA54 791 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 Q8NA96 180 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 SPON2Q9BUD6 331 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 SIK2Q9H0K1 926 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 FAM204AQ9H8W3 233 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 ST7Q9NRC1 585 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 RRN3Q9NYV6 651 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 ENTPD4Q9Y227 616 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 POLHQ9Y253 713 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 RPS6KL1Q9Y6S9 549 aa15.53■□□□□ 0.08
CLSTN3-216ENST00000545663 ABCA2Q9BZC7 2435 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms