RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 KLF2Q9Y5W3 355 aaPredicted RBP6.96□□□□□ -1.3
LDHA-223ENST00000545215 STON1Q9Y6Q2 735 aa6.96□□□□□ -1.3
LDHA-223ENST00000545215 C2orf78A6NCI8 922 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 NKX2-8O15522 239 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 HOXC11O43248 304 aaPredicted RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 CSH1P0DML2 217 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 CSH2P0DML3 217 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 HARSP12081 509 aaKnown RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 PAMP19021 973 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 DGKAP23743 735 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 ITGB7P26010 798 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 CD82P27701 267 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 NCKAP1LP55160 1127 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 PER3P56645 1201 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 YBX1P67809 324 aaKnown RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 GTF2BQ00403 316 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 FOXD4Q12950 439 aaPredicted RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 ART3Q13508 389 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 PNOCQ13519 176 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 CUL4BQ13620 913 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 ENPP2Q13822 863 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 BMT2Q1RMZ1 405 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 PRR30Q53SZ7 412 aaPredicted RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 ZNF658Q5TYW1 1059 aaPredicted RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 TAF3Q5VWG9 929 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 MBLAC2Q68D91 279 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 NXNQ6DKJ4 435 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 FOXR2Q6PJQ5 311 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 SASS6Q6UVJ0 657 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 TREML4Q6UXN2 200 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 ZNF720Q7Z2F6 126 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 TSPYL5Q86VY4 417 aaPredicted RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 MLKLQ8NB16 471 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 GOLGA5Q8TBA6 731 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 CHTF18Q8WVB6 975 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 SCFD1Q8WVM8 642 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 P2RY11Q96G91 374 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 ACO2Q99798 780 aaKnown RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 TCHPQ9BT92 498 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 BTBD1Q9H0C5 482 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 BLZF1Q9H2G9 400 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 ZHX3Q9H4I2 956 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 MRPL44Q9H9J2 332 aaKnown RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 SLC38A7Q9NVC3 462 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 GPATCH2Q9NW75 528 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 PNMA8BQ9ULN7 279 aaPredicted RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 MAGED2Q9UNF1 606 aaPredicted RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 ZKSCAN5Q9Y2L8 839 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 TIMM13Q9Y5L4 95 aaPredicted RBP6.95□□□□□ -1.3
LDHA-223ENST00000545215 NUMA1Q14980 2115 aa6.95□□□□□ -1.3
LDHA-223ENST00000545215 TRBV23OR9-2A0A075B6M9 112 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 CCDC66A2RUB6 948 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 K7ENM7 598 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 PSMA7O14818 248 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 KIAA0391O15091 583 aaKnown RBP6.94□□□□□ -1.3
LDHA-223ENST00000545215 SLC16A4O15374 487 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 FGF10O15520 208 aaPredicted RBP6.94□□□□□ -1.3
LDHA-223ENST00000545215 KLRC4O43908 158 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 PIGRP01833 764 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 GSTM1P09488 218 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 MCF2P10911 925 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 HAPLN1P10915 354 aaPredicted RBP6.94□□□□□ -1.3
LDHA-223ENST00000545215 HGFP14210 728 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 LIFP15018 202 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 OCRLQ01968 901 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 CAMK4Q16566 473 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 KYAT1Q16773 422 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 DEFB109BQ30KR1 87 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 MAP9Q49MG5 647 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 CYP27C1Q4G0S4 372 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 XKR4Q5GH76 650 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 KIAA0895LQ68EN5 471 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 GRAMD4Q6IC98 578 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 CAVIN1Q6NZI2 390 aaKnown RBP6.94□□□□□ -1.3
LDHA-223ENST00000545215 ARMCX5Q6P1M9 558 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 MPZL3Q6UWV2 235 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 ALKAL1Q6UXT8 129 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 ZPBP2Q6X784 338 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 DSG4Q86SJ6 1040 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 SFR1Q86XK3 245 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 GRAMD1CQ8IYS0 662 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 GUF1Q8N442 669 aaKnown RBP6.94□□□□□ -1.3
LDHA-223ENST00000545215 TMEM161BQ8NDZ6 487 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 PMM1Q92871 262 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 ACCSQ96QU6 501 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 SMR3AQ99954 134 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
LDHA-223ENST00000545215 NAT10Q9H0A0 1025 aaKnown RBP6.94□□□□□ -1.3
LDHA-223ENST00000545215 CDIP1Q9H305 208 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 TRIT1Q9H3H1 467 aaKnown RBP6.94□□□□□ -1.3
LDHA-223ENST00000545215 IPPKQ9H8X2 491 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 CHST11Q9NPF2 352 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 SPTLC3Q9NUV7 552 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 ANO10Q9NW15 660 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 UCKL1Q9NWZ5 548 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 RRN3Q9NYV6 651 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 FOXJ2Q9P0K8 574 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 COPG2Q9UBF2 871 aa6.94□□□□□ -1.3
LDHA-223ENST00000545215 UXTQ9UBK9 157 aaPredicted RBP6.94□□□□□ -1.3
LDHA-223ENST00000545215 PCDHGB6Q9Y5F9 930 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms