RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SLITRK3O94933 977 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 SMCO1Q147U7 214 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 KLHL23Q8NBE8 558 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 MAGEC3Q8TD91 643 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 PPP1R13LQ8WUF5 828 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 TPK1Q9H3S4 243 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 PNPOQ9NVS9 261 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 DHRS7Q9Y394 339 aa15.54■□□□□ 0.08
CHD4-210ENST00000544040 H0Y858 1186 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 ZNF432O94892 652 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 STK40Q8N2I9 435 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 PPP1R14BQ96C90 147 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 PNMA5Q96PV4 448 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 FAM129BQ96TA1 746 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 OSBPL11Q9BXB4 747 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 OR12D3Q9UGF7 316 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 LIASO43766 372 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 SLC28A2O43868 658 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 AVILO75366 819 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 METTL7BQ6UX53 244 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 VANGL1Q8TAA9 524 aaPredicted RBP15.53■□□□□ 0.08
CHD4-210ENST00000544040 GJD4Q96KN9 370 aaPredicted RBP15.53■□□□□ 0.08
CHD4-210ENST00000544040 CCDC115Q96NT0 180 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 NOL11Q9H8H0 719 aaKnown RBP15.53■□□□□ 0.08
CHD4-210ENST00000544040 ZNF446Q9NWS9 450 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 THG1LQ9NWX6 298 aaKnown RBP15.53■□□□□ 0.08
CHD4-210ENST00000544040 TBC1D30Q9Y2I9 924 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 SIN3BO75182 1162 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 CTSEP14091 401 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 CAPGP40121 348 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 TAS2R41P59536 307 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 GSTCDQ8NEC7 633 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 VCPIP1Q96JH7 1222 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 PRODHO43272 600 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 ERAL1O75616 437 aaKnown RBP15.53■□□□□ 0.08
CHD4-210ENST00000544040 ATP5F1P24539 256 aaPredicted RBP15.53■□□□□ 0.08
CHD4-210ENST00000544040 SERPINA4P29622 427 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 RIPK1Q13546 671 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 ZC3H12AQ5D1E8 599 aaKnown RBP15.53■□□□□ 0.08
CHD4-210ENST00000544040 CXorf57Q6NSI4 855 aaKnown RBP15.53■□□□□ 0.08
CHD4-210ENST00000544040 ZNF613Q6PF04 617 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 MNTQ99583 582 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 C1QTNF1Q9BXJ1 281 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 TELO2Q9Y4R8 837 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 BICRAQ9NZM4 1560 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 A0A0A0MRY4 1105 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 SLC28A1O00337 649 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 PGRMC2O15173 223 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 TPD52L2O43399 206 aaKnown RBP15.53■□□□□ 0.08
CHD4-210ENST00000544040 ULK1O75385 1050 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 MAMLD1Q13495 774 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 SPATA13Q96N96 652 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 FCRL4Q96PJ5 515 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 SLCO1B3Q9NPD5 702 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 RASSF1Q9NS23 344 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 ZNF224Q9NZL3 707 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 CCDC59Q9P031 241 aaKnown RBP15.53■□□□□ 0.08
CHD4-210ENST00000544040 DMTF1Q9Y222 760 aa15.53■□□□□ 0.08
CHD4-210ENST00000544040 ARHGEF33A8MVX0 844 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 GTPBP1O00178 669 aaKnown RBP15.52■□□□□ 0.08
CHD4-210ENST00000544040 SEMA5AQ13591 1074 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.52■□□□□ 0.08
CHD4-210ENST00000544040 ADGRA1Q86SQ6 560 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 HOMEZQ8IX15 550 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 RP9Q8TA86 221 aaKnown RBP15.52■□□□□ 0.08
CHD4-210ENST00000544040 TMPRSS4Q9NRS4 437 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 NCKAP1Q9Y2A7 1128 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 PDE2AO00408 941 aaPredicted RBP15.52■□□□□ 0.08
CHD4-210ENST00000544040 CDC40O60508 579 aaKnown RBP eCLIP15.52■□□□□ 0.083e-6■■■□□ 18.9
CHD4-210ENST00000544040 SCN2BO60939 215 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 MLYCDO95822 493 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 GCNT1Q02742 428 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 CTBP1Q13363 440 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 RAET1GQ6H3X3 334 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 GPRIN3Q6ZVF9 776 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 ALLCQ8N6M5 410 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 CATP04040 527 aaKnown RBP15.52■□□□□ 0.08
CHD4-210ENST00000544040 DRD4P21917 467 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 RAB10P61026 200 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 ROR2Q01974 943 aaKnown RBP15.52■□□□□ 0.08
CHD4-210ENST00000544040 USP4Q13107 963 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 SLC27A1Q6PCB7 646 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 ADGRG2Q8IZP9 1017 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 NKAPQ8N5F7 415 aaKnown RBP15.52■□□□□ 0.08
CHD4-210ENST00000544040 SLC35C1Q96A29 364 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 OR52E6Q96RD3 313 aa15.52■□□□□ 0.08
CHD4-210ENST00000544040 MCIDASD6RGH6 385 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 PQBP1O60828 265 aaKnown RBP15.52■□□□□ 0.07
CHD4-210ENST00000544040 AMD1P17707 334 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 RPL22P35268 128 aaKnown RBP15.52■□□□□ 0.07
CHD4-210ENST00000544040 RARRES1P49788 294 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 IQSEC1Q6DN90 963 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 GK5Q6ZS86 529 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 PARGQ86W56 976 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 CLHC1Q8NHS4 586 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 CXorf40AQ8TE69 158 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 GIT1Q9Y2X7 761 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 ZMYM2Q9UBW7 1377 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 SERPINA6P08185 405 aa15.52■□□□□ 0.07
CHD4-210ENST00000544040 PIK3R6Q5UE93 754 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms