RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 POLR2LP62875 67 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CKAP4Q07065 602 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SRSF5Q13243 272 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 LRRC73Q5JTD7 316 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PIP5KL1Q5T9C9 394 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 AGBL4Q5VU57 503 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ZC3H14Q6PJT7 736 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 KDELC2Q7Z4H8 507 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 KLHL7Q8IXQ5 586 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PRSS33Q8NF86 280 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 NELL1Q92832 810 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ECHDC3Q96DC8 303 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TOE1Q96GM8 510 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PPP1R2P1Q96PQ5 205 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TDRD1Q9BXT4 1180 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FEZ2Q9UHY8 353 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CHKBQ9Y259 395 aa14.6□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TSPAN11A1L157 253 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GOLGA6CA6NDK9 693 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GOLGA6BA6NDN3 693 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PRR23AA6NEV1 266 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 UPK3BL1B0FP48 263 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 UPK3BL2E5RIL1 263 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 NEMP1O14524 444 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ZSCAN5DPP0CG00 497 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GOLGA6DP0CG33 693 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TIMP2P16035 220 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ACSL1P33121 698 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ADPRHP54922 357 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GEMP55040 296 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TCF15Q12870 199 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 MPP3Q13368 585 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 IHHQ14623 411 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SLC14A2Q15849 920 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 UGP2Q16851 508 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PARP6Q2NL67 630 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 DNTTIP2Q5QJE6 756 aaKnown RBP14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FAXCQ5TGI0 409 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 SLC36A4Q6YBV0 504 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CEP68Q76N32 757 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ZSWIM9Q86XI8 627 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 NDUFAF2Q8N183 169 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GLIS1Q8NBF1 620 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 ZBTB44Q8NCP5 570 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 IPMKQ8NFU5 416 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 RAB7BQ96AH8 199 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 OXNAD1Q96HP4 312 aaPredicted RBP14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GPR174Q9BXC1 333 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 FSD1LQ9BXM9 530 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PCDH9Q9HC56 1237 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 VPS45Q9NRW7 570 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 GOLGA6AQ9NYA3 693 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 WSB2Q9NYS7 404 aaPredicted RBP14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 PAK5Q9P286 719 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 AAR2Q9Y312 384 aaKnown RBP14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 CEP192Q8TEP8 1941 aa14.59□□□□□ -0.07
TNFRSF1A-216ENST00000543995 TBC1D3DA0A087WVF3 549 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TBC1D3IA0A087WXS9 549 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TBC1D3EA0A087X179 549 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TBC1D3KA0A087X1G2 549 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TBC1D3FA6NER0 549 aaPredicted RBP14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LRRC72A6NJI9 287 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TBC1D3LB9A6J9 549 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 HRO43593 1189 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PLRG1O43660 514 aaKnown RBP14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PCDH8O95206 1070 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 METTL18O95568 372 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ECEL1O95672 775 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 SEMA4FO95754 770 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 GAS8O95995 478 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 KRT14P02533 472 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PRKCGP05129 697 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PDHA1P08559 390 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TBC1D3HP0C7X1 549 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 NFKBIAP25963 317 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ABL2P42684 1182 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RPL6Q02878 288 aaKnown RBP14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TUBB2AQ13885 445 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PPP1R7Q15435 360 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TRIP13Q15645 432 aaPredicted RBP14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TBC1D3GQ6DHY5 549 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TBC1D3CQ6IPX1 549 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CCDC70Q6NSX1 233 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ERAP2Q6P179 960 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 C11orf74Q86VG3 221 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TBC1D3Q8IZP1 549 aaPredicted RBP14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LPCAT1Q8NF37 534 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 FAM131CQ96AQ9 280 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 LRRC45Q96CN5 670 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RMDN1Q96DB5 314 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 RUNDC3BQ96NL0 473 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 TUBB2BQ9BVA1 445 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ADGRE3Q9BY15 652 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 IRF2BPLQ9H1B7 796 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 MBD1Q9UIS9 605 aaPredicted RBP14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 PHTF1Q9UMS5 762 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 HCN4Q9Y3Q4 1203 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 ARIH1Q9Y4X5 557 aaPredicted RBP14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 NUMA1Q14980 2115 aa14.58□□□□□ -0.08
TNFRSF1A-216ENST00000543995 CUL9Q8IWT3 2517 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms