RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ANKRD20A1Q5TYW2 823 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 ANKRD20A3Q5VUR7 823 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 PAPD7Q5XG87 772 aaKnown RBP6.37□□□□□ -1.39
LTBR-212ENST00000543542 LYSMD4Q5XG99 296 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 DENND2CQ68D51 928 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 BRAT1Q6PJG6 821 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 CYP2U1Q7Z449 544 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 PRPF39Q86UA1 669 aaKnown RBP6.37□□□□□ -1.39
LTBR-212ENST00000543542 RASGEF1CQ8N431 466 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 TAB3Q8N5C8 712 aaPredicted RBP6.37□□□□□ -1.39
LTBR-212ENST00000543542 ZBTB44Q8NCP5 570 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 LPCAT1Q8NF37 534 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 OR2T34Q8NGX1 318 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 SPATA22Q8NHS9 363 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 CCDC110Q8TBZ0 833 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 ACTRT1Q8TDG2 376 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 HCAR2Q8TDS4 363 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 FOXJ1Q92949 421 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 RAB7BQ96AH8 199 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 FEM1CQ96JP0 617 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 TEKT5Q96M29 485 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 HSPA12BQ96MM6 686 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 PPP1R2P1Q96PQ5 205 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 FSD1LQ9BXM9 530 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 ADGRE3Q9BY15 652 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 HDAC8Q9BY41 377 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 MIR1-1HGQ9H1L0 117 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 C6orf106Q9H6K1 298 aaPredicted RBP6.37□□□□□ -1.39
LTBR-212ENST00000543542 PCDH9Q9HC56 1237 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 SMARCAL1Q9NZC9 954 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 NCDNQ9UBB6 729 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 DKK3Q9UBP4 350 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 SERGEFQ9UGK8 458 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 FAM153AQ9UHL3 310 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 RAPGEFL1Q9UHV5 662 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 MBD1Q9UIS9 605 aaPredicted RBP6.37□□□□□ -1.39
LTBR-212ENST00000543542 GMEB2Q9UKD1 530 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 PHTF1Q9UMS5 762 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 CHKBQ9Y259 395 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 THADAQ6YHU6 1953 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 PLXND1Q9Y4D7 1925 aa6.37□□□□□ -1.39
LTBR-212ENST00000543542 TTC28Q96AY4 2481 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 WDFY4Q6ZS81 3184 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 ATXN2Q99700 1313 aaKnown RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 A0A1W2PQU0 124 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 GOLGA8CPA6NN73 597 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 UPK3BL1B0FP48 263 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 UPK3BL2E5RIL1 263 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 TSPAN6O43657 245 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 LZTS3O60299 673 aaPredicted RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 OPHN1O60890 802 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 LILRB5O75023 590 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PHF2O75151 1096 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PGLSO95336 258 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 GAS8O95995 478 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 MT-CYBP00156 380 aaPredicted RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 IGLV3-19P01714 112 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 SLC4A1P02730 911 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PRKCGP05129 697 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 ITGAVP06756 1048 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 GNSP15586 552 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 TIMP2P16035 220 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 CR2P20023 1033 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PSMB4P28070 264 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 ABL2P42684 1182 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 SUOXP51687 545 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 TERF1P54274 439 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 SKOR1P84550 965 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 SEMG2Q02383 582 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 CDK18Q07002 472 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 SGCGQ13326 291 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 MPP3Q13368 585 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 ARHGEF7Q14155 803 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 GALNT3Q14435 633 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PPP1R7Q15435 360 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 UGP2Q16851 508 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 P3H1Q32P28 736 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PLK5Q496M5 336 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 DNTTIP2Q5QJE6 756 aaKnown RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 PIP5KL1Q5T9C9 394 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 AGBL4Q5VU57 503 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PMS2CLQ68D20 193 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 KIAA0895LQ68EN5 471 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 CCDC137Q6PK04 289 aaKnown RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 USP45Q70EL2 814 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 ZSCAN30Q86W11 494 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 KLHL7Q8IXQ5 586 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 SLC25A41Q8N5S1 370 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 CNTD1Q8N815 330 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 IPMKQ8NFU5 416 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 ATL2Q8NHH9 583 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 SLC35B2Q8TB61 432 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 ARRDC2Q8TBH0 407 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 GRK7Q8WTQ7 553 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 PIGKQ92643 395 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 NELL1Q92832 810 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 KLK6Q92876 244 aa6.36□□□□□ -1.39
LTBR-212ENST00000543542 NKD2Q969F2 451 aaPredicted RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 IMP4Q96G21 291 aaKnown RBP6.36□□□□□ -1.39
LTBR-212ENST00000543542 SPATA13Q96N96 652 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms