RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SLC14A2Q15849 920 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 CCNG2Q16589 344 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 UGP2Q16851 508 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 TBC1D3GQ6DHY5 549 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 TBC1D3CQ6IPX1 549 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 NEK5Q6P3R8 708 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 PRPF39Q86UA1 669 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 TBC1D3Q8IZP1 549 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 PAF1Q8N7H5 531 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 MS4A14Q96JA4 679 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 HSPA12BQ96MM6 686 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 PHOX2BQ99453 314 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 RAI2Q9Y5P3 530 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 ANKRD36A6QL64 1941 aa17.25■□□□□ 0.35
RABGGTA-203ENST00000543002 FZD6O60353 706 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 PGLSO95336 258 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 NFKB1P19838 968 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 CA4P22748 312 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 XPAP23025 273 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 CCR5P51681 352 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 ETF1P62495 437 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 ANKRD20A2Q5SQ80 823 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 ARMC12Q5T9G4 340 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 ANKRD20A1Q5TYW2 823 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 ANKRD20A3Q5VUR7 823 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 LYSMD4Q5XG99 296 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 DRICH1Q6PGQ1 229 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 ARMCX6Q7L4S7 300 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 ACTRT1Q8TDG2 376 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 PDCD6IPQ8WUM4 868 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 TADA1Q96BN2 335 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 NAP1L3Q99457 506 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 TMEM121Q9BTD3 319 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 TDRD1Q9BXT4 1180 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 TPX2Q9ULW0 747 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 PCDHB9Q9Y5E1 797 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 SDK1Q7Z5N4 2213 aa17.24■□□□□ 0.35
RABGGTA-203ENST00000543002 VPS13AQ96RL7 3174 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 PRR23AA6NEV1 266 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 C5orf60A6NFR6 353 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 MEI4A8MW99 385 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 PGRMC1O00264 195 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 FANCGO15287 622 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 SPINT1O43278 529 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 TSPAN6O43657 245 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 FSBPO95073 299 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 EPN2O95208 641 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 CPP00450 1065 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 IGHV4-34P06331 123 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 STIP1P31948 543 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 ELP6Q0PNE2 266 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 LRRC73Q5JTD7 316 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 SYCP2LQ5T4T6 812 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 ITPRIPL1Q6GPH6 555 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 TRIM69Q86WT6 500 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 FAM71DQ8N9W8 422 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 DNASE2BQ8WZ79 361 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 BIRC7Q96CA5 298 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 SPATA13Q96N96 652 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 FCRL5Q96RD9 977 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 RBM15Q96T37 977 aaKnown RBP eCLIP17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 PCDH12Q9NPG4 1184 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 HOMER3Q9NSC5 361 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 RSPH14Q9UHP6 348 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 PHTF1Q9UMS5 762 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 ZNF148Q9UQR1 794 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 PCDHGA5Q9Y5G8 931 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 GPR179Q6PRD1 2367 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 CEP192Q8TEP8 1941 aa17.23■□□□□ 0.35
RABGGTA-203ENST00000543002 NEMP1O14524 444 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 RIOK3O14730 519 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 ZNF185O15231 689 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 LATO43561 262 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 OPHN1O60890 802 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 RNGTTO60942 597 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 PCDH8O95206 1070 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 ITGAVP06756 1048 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 RETP07949 1114 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 PDHA1P08559 390 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 ITIH2P19823 946 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 PPP2CBP62714 309 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 PPP2CAP67775 309 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 SNX1Q13596 522 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 WDR45BQ5MNZ6 344 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 ERAP2Q6P179 960 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 CYP2U1Q7Z449 544 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 ZSCAN30Q86W11 494 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 PRELID2Q8N945 189 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 SPATA22Q8NHS9 363 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 CCDC110Q8TBZ0 833 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 PIH1D2Q8WWB5 315 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 RTP4Q96DX8 246 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 FEM1CQ96JP0 617 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 GBA3Q9H227 469 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 PCDH9Q9HC56 1237 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 GGT7Q9UJ14 662 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 GMEB2Q9UKD1 530 aa17.22■□□□□ 0.35
RABGGTA-203ENST00000543002 CHKBQ9Y259 395 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms