RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 ITFG2Q969R8 447 aa10.63□□□□□ -0.71
PHACTR3-209ENST00000541461 HAUS8Q9BT25 410 aa10.63□□□□□ -0.71
PHACTR3-209ENST00000541461 DNAI2Q9GZS0 605 aa10.63□□□□□ -0.71
PHACTR3-209ENST00000541461 LRRC4Q9HBW1 653 aa10.63□□□□□ -0.71
PHACTR3-209ENST00000541461 HMX1Q9NP08 348 aaPredicted RBP10.63□□□□□ -0.71
PHACTR3-209ENST00000541461 CCDC167Q9P0B6 97 aa10.63□□□□□ -0.71
PHACTR3-209ENST00000541461 THEGQ9P2T0 379 aa10.63□□□□□ -0.71
PHACTR3-209ENST00000541461 GMPR2Q9P2T1 348 aaKnown RBP10.63□□□□□ -0.71
PHACTR3-209ENST00000541461 SUCOQ9UBS9 1254 aaKnown RBP10.63□□□□□ -0.71
PHACTR3-209ENST00000541461 TSC2P49815 1807 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 FAM95CA0A1B0GW59 222 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 TRPC5OSA6NMA1 111 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 H3BNH8 94 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 TRIM24O15164 1050 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 CYP2C9P11712 490 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 CKMT2P17540 419 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 TKTL1P51854 596 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 MAP3K7CLP57077 242 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 SEMA3BQ13214 749 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 TMED1Q13445 227 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 POU6F1Q14863 301 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 REP15Q6BDI9 236 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 ITPRIPL1Q6GPH6 555 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 SLC27A1Q6PCB7 646 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 CXCL17Q6UXB2 119 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 ALKAL1Q6UXT8 129 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 PAQR9Q6ZVX9 377 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 LPCAT2Q7L5N7 544 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 CATSPER4Q7RTX7 472 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 SIX6OS1Q8N1H7 587 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 HEXDCQ8WVB3 486 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 TEKT5Q96M29 485 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 SLC2A13Q96QE2 648 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 KIFC1Q9BW19 673 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 OSBPL11Q9BXB4 747 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 UNC93B1Q9H1C4 597 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 CYP4F12Q9HCS2 524 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 WDR6Q9NNW5 1121 aaKnown RBP10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 CACNA2D2Q9NY47 1150 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 UTP6Q9NYH9 597 aaKnown RBP10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 SLC2A6Q9UGQ3 507 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 TRHDEQ9UKU6 1024 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 HEATR9A2RTY3 570 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 YJEFN3A6XGL0 299 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 COL6A2P12110 1019 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 STMN1P16949 149 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 KCNA5P22460 613 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 ALDH3B2P48448 385 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 CPT1AP50416 773 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 GJA9P57773 515 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 SULT2A1Q06520 285 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 SOX4Q06945 474 aaPredicted RBP10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 FASTKQ14296 549 aaKnown RBP10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 PITRM1Q5JRX3 1037 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 KRT80Q6KB66 452 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 ESRP1Q6NXG1 681 aaKnown RBP10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 DNAJC14Q6Y2X3 702 aaPredicted RBP10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 RIN3Q8TB24 985 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 STON2Q8WXE9 905 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 IRGQQ8WZA9 623 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 HDAC11Q96DB2 347 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 ELMO2Q96JJ3 720 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 HNRNPABQ99729 332 aaKnown RBP10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 FAM49AQ9H0Q0 323 aaPredicted RBP10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 MRPL46Q9H2W6 279 aaKnown RBP10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 NCKIPSDQ9NZQ3 722 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 CIDEBQ9UHD4 219 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 MYRFQ9Y2G1 1151 aa10.62□□□□□ -0.71
PHACTR3-209ENST00000541461 RALGAPA2Q2PPJ7 1873 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 SMIM28A0A1B0GU29 152 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 PSMD12O00232 456 aaPredicted RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 NCAM2O15394 837 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 HTRA2O43464 458 aaPredicted RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 NPHS1O60500 1241 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 TIPRLO75663 272 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 MT-CYBP00156 380 aaPredicted RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 MT-CO1P00395 513 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 CCDC166P0CW27 439 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 HOXD8P13378 290 aaPredicted RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 NPR3P17342 541 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 IGFBP6P24592 240 aaPredicted RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 PSMD8P48556 350 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 CDK9P50750 372 aaKnown RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 TAS2R39P59534 338 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 GALNT2Q10471 571 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 STX5Q13190 355 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 GRIK4Q16099 956 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 NAPEPLDQ6IQ20 393 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 PKN3Q6P5Z2 889 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 ARHGAP36Q6ZRI8 547 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 CLEC20AQ6ZU45 233 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 CHSY3Q70JA7 882 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 ERI1Q8IV48 349 aaKnown RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 PPWD1Q96BP3 646 aaKnown RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 HSPBAP1Q96EW2 488 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 RMND5BQ96G75 393 aaPredicted RBP10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 SLC39A3Q9BRY0 314 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 MED10Q9BTT4 135 aa10.61□□□□□ -0.71
PHACTR3-209ENST00000541461 ULBP1Q9BZM6 244 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms