RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 PNKPQ96T60 521 aa6.24□□□□□ -1.41
LMO3-225ENST00000541295 COPS4Q9BT78 406 aa6.24□□□□□ -1.41
LMO3-225ENST00000541295 ZNF341Q9BYN7 854 aa6.24□□□□□ -1.41
LMO3-225ENST00000541295 CBX8Q9HC52 389 aa6.24□□□□□ -1.41
LMO3-225ENST00000541295 PLSCR4Q9NRQ2 329 aa6.24□□□□□ -1.41
LMO3-225ENST00000541295 DNAJC17Q9NVM6 304 aaKnown RBP6.24□□□□□ -1.41
LMO3-225ENST00000541295 THUMPD1Q9NXG2 353 aaKnown RBP6.24□□□□□ -1.41
LMO3-225ENST00000541295 NRXN2Q9P2S2 1712 aa6.24□□□□□ -1.41
LMO3-225ENST00000541295 HPSEQ9Y251 543 aa6.24□□□□□ -1.41
LMO3-225ENST00000541295 PCDHGA9Q9Y5G4 932 aaKnown RBP6.24□□□□□ -1.41
LMO3-225ENST00000541295 SCN9AQ15858 1988 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 ECM29Q5VYK3 1845 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 A0A1W2PPH5 198 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 DDTLA6NHG4 134 aaPredicted RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 USP17L5A8MUK1 530 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 LINC01387J3KSC0 135 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 TRIM38O00635 465 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 DPYSL4O14531 572 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 MAGEC1O60732 1142 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 TRMUO75648 421 aaKnown RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 ZNF888P0CJ79 500 aaPredicted RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 ITIH1P19827 911 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 NFKB1P19838 968 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 CCR10P46092 362 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 HCAR3P49019 387 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 PRRX1P54821 245 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 C21orf59P57076 290 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 GRIN1Q05586 938 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 TOP3AQ13472 1001 aaPredicted RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 DDX39BQ13838 428 aaKnown RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 STAT4Q14765 748 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 GRM4Q14833 912 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 PRKD1Q15139 912 aaPredicted RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 PLA2G4FQ68DD2 849 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 CYP20A1Q6UW02 462 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 IL27RAQ6UWB1 636 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 ZNF783Q6ZMS7 281 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 RTL4Q6ZR62 310 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 TMCO2Q7Z6W1 182 aaPredicted RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 CENPSQ8N2Z9 138 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 BBS1Q8NFJ9 593 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 OR4D10Q8NGI6 311 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 ZNF671Q8TAW3 534 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 PRR7Q8TB68 274 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 KIAA1143Q96AT1 154 aaPredicted RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 TEKT5Q96M29 485 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 QKIQ96PU8 341 aaKnown RBP eCLIP6.23□□□□□ -1.41
LMO3-225ENST00000541295 CCNL2Q96S94 520 aaPredicted RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 SSX3Q99909 188 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 CHID1Q9BWS9 393 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 ADAM19Q9H013 955 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 UNC93B1Q9H1C4 597 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 ISCUQ9H1K1 167 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 SLC26A1Q9H2B4 701 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 NPHS2Q9NP85 383 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 EXD2Q9NVH0 621 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 DCDC2Q9UHG0 476 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 PRELID3BQ9Y3B1 194 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 ROBO3Q96MS0 1386 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 LINC00587B1AMM8 73 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 DENRO43583 198 aaKnown RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 GCATO75600 419 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 PPM1BO75688 479 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 SUN1O94901 812 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 ITGB6P18564 788 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 GNAZP19086 355 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 TLX1P31314 330 aaPredicted RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 MCM7P33993 719 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 SYKP43405 635 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 NRLP54845 237 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 NAPAP54920 295 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 ZNF45Q02386 682 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 PRKCZQ05513 592 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 DSC1Q08554 894 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 PPP2R5EQ16537 467 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 PITRM1Q5JRX3 1037 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 RARS2Q5T160 578 aaKnown RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 RWDD4Q6NW29 188 aaKnown RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 TAC4Q86UU9 113 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 LRRTM4Q86VH4 590 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 GPR65Q8IYL9 337 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 SLC20A1Q8WUM9 679 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 C7orf43Q8WVR3 580 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 STMN2Q93045 179 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 PRMT6Q96LA8 375 aaPredicted RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 CCDC17Q96LX7 622 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 CITED4Q96RK1 184 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 LMF1Q96S06 567 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 FUCA2Q9BTY2 467 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 PCDH9Q9HC56 1237 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 TRIM39Q9HCM9 518 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 OLFML3Q9NRN5 406 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 SNTG1Q9NSN8 517 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 TRMT13Q9NUP7 481 aaKnown RBP6.23□□□□□ -1.41
LMO3-225ENST00000541295 AGPAT5Q9NUQ2 364 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 CYP39A1Q9NYL5 469 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 TJP2Q9UDY2 1190 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 AP4E1Q9UPM8 1137 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 DLGAP4Q9Y2H0 992 aa6.23□□□□□ -1.41
LMO3-225ENST00000541295 UTP11Q9Y3A2 253 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms