RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 CCDC70Q6NSX1 233 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 HIBCHQ6NVY1 386 aaPredicted RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 ZDHHC24Q6UX98 284 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 PPIL6Q8IXY8 311 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 NAT8LQ8N9F0 302 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 GRIN3AQ8TCU5 1115 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 IFT81Q8WYA0 676 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 UBXN4Q92575 508 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 PRCCQ92733 491 aaPredicted RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 EDAQ92838 391 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 SMIM14Q96QK8 99 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 HEPHQ9BQS7 1158 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 FICDQ9BVA6 458 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 CPEB1Q9BZB8 566 aaKnown RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 SLC6A17Q9H1V8 727 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 NEUROG2Q9H2A3 272 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 PIH1D1Q9NWS0 290 aaKnown RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 WHRNQ9P202 907 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 IL36AQ9UHA7 158 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 ANAPC5Q9UJX4 755 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 SARDHQ9UL12 918 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 CHKBQ9Y259 395 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 MRPS17Q9Y2R5 130 aaKnown RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 AAR2Q9Y312 384 aaKnown RBP9.43□□□□□ -0.9
DDX55-208ENST00000541259 EML5Q05BV3 1969 aa9.43□□□□□ -0.9
DDX55-208ENST00000541259 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.42□□□□□ -0.9
DDX55-208ENST00000541259 PLK4O00444 970 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 TRAFD1O14545 582 aaPredicted RBP9.42□□□□□ -0.9
DDX55-208ENST00000541259 NPC1O15118 1278 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 PSMD3O43242 534 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 DCXO43602 365 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 SUN1O94901 812 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 UGT2B4P06133 528 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 HOXB2P14652 356 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 JUNDP17535 347 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 TPH1P17752 444 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 ITIH2P19823 946 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 TPSB2P20231 275 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 ECHS1P30084 290 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 MAGEA6P43360 314 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 COPAP53621 1224 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 PLTPP55058 493 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 CDK18Q07002 472 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 BCL2L1Q07817 233 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 SIGLEC14Q08ET2 396 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 MPP3Q13368 585 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 MTM1Q13496 603 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 CAMK2GQ13555 558 aaPredicted RBP9.42□□□□□ -0.9
DDX55-208ENST00000541259 LRRC32Q14392 662 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 GALNT3Q14435 633 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 TPSAB1Q15661 275 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 RALGPS1Q5JS13 557 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 DESI1Q6ICB0 168 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 DENND5AQ6IQ26 1287 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 SDE2Q6IQ49 451 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 GDPD4Q6W3E5 623 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 TRIM67Q6ZTA4 783 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 ZNF534Q76KX8 674 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 TRMT11Q7Z4G4 463 aaKnown RBP9.42□□□□□ -0.9
DDX55-208ENST00000541259 ZSWIM9Q86XI8 627 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 MMAAQ8IVH4 418 aaKnown RBP9.42□□□□□ -0.9
DDX55-208ENST00000541259 GSPT2Q8IYD1 628 aaKnown RBP9.42□□□□□ -0.9
DDX55-208ENST00000541259 SLC25A41Q8N5S1 370 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 FLCNQ8NFG4 579 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 PJA1Q8NG27 643 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 OR52K1Q8NGK4 314 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 FBXO25Q8TCJ0 367 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 PDCD6IPQ8WUM4 868 aaKnown RBP9.42□□□□□ -0.9
DDX55-208ENST00000541259 OR8D1Q8WZ84 308 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 ART4Q93070 314 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 KLHL32Q96NJ5 620 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 TRIB3Q96RU7 358 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 NELL2Q99435 816 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 TBL1YQ9BQ87 522 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 TDRD1Q9BXT4 1180 aaKnown RBP9.42□□□□□ -0.9
DDX55-208ENST00000541259 SUV39H2Q9H5I1 410 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 ATP13A3Q9H7F0 1226 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 CD248Q9HCU0 757 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 PRM3Q9NNZ6 103 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 FAM114A2Q9NRY5 505 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 ZDHHC18Q9NUE0 388 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 HAUS2Q9NVX0 235 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 PPM1HQ9ULR3 514 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 MMP17Q9ULZ9 603 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 TRPM6Q9BX84 2022 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 SCN8AQ9UQD0 1980 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 CEP192Q8TEP8 1941 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 A0A0C4DFX4 3053 aa9.42□□□□□ -0.9
DDX55-208ENST00000541259 MUC3AQ02505 3323 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 LOC285095A0A1B0GVY8 99 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 CHURC1-FNTBB4DL54 471 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 KPNA3O00505 521 aaPredicted RBP9.41□□□□□ -0.9
DDX55-208ENST00000541259 HTRA2O43464 458 aaPredicted RBP9.41□□□□□ -0.9
DDX55-208ENST00000541259 PI15O43692 258 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 FZD6O60353 706 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 SYNCRIPO60506 623 aaKnown RBP9.41□□□□□ -0.9
DDX55-208ENST00000541259 AVILO75366 819 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 BANF1O75531 89 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 PRKCGP05129 697 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 DCNP07585 359 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms