RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 ME2P23368 584 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 RPL5P46777 297 aaKnown RBP12.63□□□□□ -0.39
RNF4-222ENST00000541204 CSRP3P50461 194 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 CDKL1Q00532 357 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 MYBPC1Q00872 1141 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 NADK2Q4G0N4 442 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 NOMO2Q5JPE7 1267 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 ZFP1Q6P2D0 407 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 PAOXQ6QHF9 649 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 ZNF354CQ86Y25 554 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 MIB1Q86YT6 1006 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 TICAM1Q8IUC6 712 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 CCNYL1Q8N7R7 359 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 RDH11Q8TC12 318 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 CD99L2Q8TCZ2 262 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 STYXQ8WUJ0 223 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 SUDS3Q9H7L9 328 aaPredicted RBP12.63□□□□□ -0.39
RNF4-222ENST00000541204 TBC1D13Q9NVG8 400 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 XPR1Q9UBH6 696 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 VPS28Q9UK41 221 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 NEU3Q9UQ49 428 aa12.63□□□□□ -0.39
RNF4-222ENST00000541204 COPG1Q9Y678 874 aaKnown RBP12.63□□□□□ -0.39
RNF4-222ENST00000541204 CCDC160A6NGH7 325 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 ERI2A8K979 691 aaKnown RBP12.62□□□□□ -0.39
RNF4-222ENST00000541204 DLX3O60479 287 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 TADA2AO75478 443 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 TRPA1O75762 1119 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 CTBP1Q13363 440 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 SLC12A1Q13621 1099 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 PCSK7Q16549 785 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 EML3Q32P44 896 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 LRRC8EQ6NSJ5 796 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 SLC24A5Q71RS6 500 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 SETD3Q86TU7 594 aaPredicted RBP12.62□□□□□ -0.39
RNF4-222ENST00000541204 SPNS2Q8IVW8 549 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 DENND6AQ8IWF6 608 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 ARHGAP12Q8IWW6 846 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 PRPF18Q99633 342 aaKnown RBP12.62□□□□□ -0.39
RNF4-222ENST00000541204 RHOJQ9H4E5 214 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 EPB41L1Q9H4G0 881 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 EFCAB1Q9HAE3 211 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 NDUFA13Q9P0J0 144 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 TRHDEQ9UKU6 1024 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 ANKRD6Q9Y2G4 727 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 NT5C1B-RDH14C9J2C7 533 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 EFEMP1Q12805 493 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 CDH17Q12864 832 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 PRPSAP1Q14558 356 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 CEP97Q8IW35 865 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 ZSCAN18Q8TBC5 510 aaPredicted RBP12.62□□□□□ -0.39
RNF4-222ENST00000541204 PDCD6IPQ8WUM4 868 aaKnown RBP12.62□□□□□ -0.39
RNF4-222ENST00000541204 EZH1Q92800 747 aaPredicted RBP12.62□□□□□ -0.39
RNF4-222ENST00000541204 NXNL1Q96CM4 212 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 UROC1Q96N76 676 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 ARHGEF38Q9NXL2 777 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 VTI1BQ9UEU0 232 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 PCDHB8Q9UN66 801 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 HS3ST4Q9Y661 456 aa12.62□□□□□ -0.39
RNF4-222ENST00000541204 TTC24A2A3L6 582 aaPredicted RBP12.61□□□□□ -0.39
RNF4-222ENST00000541204 TCAF2A6NFQ2 919 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 TARM1B6A8C7 271 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 ACOT8O14734 319 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 SLC22A2O15244 555 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 MTSS1O43312 755 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 CAPN15O75808 1086 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 BCAS2O75934 225 aaPredicted RBP12.61□□□□□ -0.39
RNF4-222ENST00000541204 IGLV3-25P01717 112 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 HK2P52789 917 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 MPP1Q00013 466 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 MAP7Q14244 749 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 KLHDC10Q6PID8 442 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 MFSD6LQ8IWD5 586 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 ADCY4Q8NFM4 1077 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 B4GALNT2Q8NHY0 566 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 RNF217Q8TC41 542 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 SGF29Q96ES7 293 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 HIC2Q96JB3 615 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 DNAJC1Q96KC8 554 aaKnown RBP12.61□□□□□ -0.39
RNF4-222ENST00000541204 FICDQ9BVA6 458 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 FTHL17Q9BXU8 183 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 OSBPL2Q9H1P3 480 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 RGS18Q9NS28 235 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 GMIPQ9P107 970 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 BCAP29Q9UHQ4 241 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 FIS1Q9Y3D6 152 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 LAMA3Q16787 3333 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 TDRD15B5MCY1 1934 aaKnown RBP12.61□□□□□ -0.39
RNF4-222ENST00000541204 PRSS51A0A1B0GVH4 220 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 E9PAM4 449 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 RNASEH2AO75792 299 aaKnown RBP12.61□□□□□ -0.39
RNF4-222ENST00000541204 VAPBO95292 243 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 TNFAIP8O95379 198 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 ARSAP15289 507 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 HADHAP40939 763 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 CHRNA4P43681 627 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 SH2D4BQ5SQS7 431 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 TSTD2Q5T7W7 516 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 FAM171A1Q5VUB5 890 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 GK5Q6ZS86 529 aa12.61□□□□□ -0.39
RNF4-222ENST00000541204 PNPLA1Q8N8W4 532 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms