RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	ZNF646	O15015	1829 aa	Predicted RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ARHGAP10	A1A4S6	786 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PIR	O00625	290 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF195	O14628	629 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TRDMT1	O14717	391 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	INPPL1	O15357	1258 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	STAMBP	O95630	424 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ERVK-10	P10266	1014 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	THRA	P10827	490 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CDH2	P19022	906 aa	Predicted RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ATP5C1	P36542	298 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF135	P52742	658 aa	Predicted RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SH3BGR	P55822	239 aa	Predicted RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MAP3K7CL	P57077	242 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ABCE1	P61221	599 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DSC1	Q08554	894 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DUSP4	Q13115	394 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CEACAM7	Q14002	265 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MBTPS1	Q14703	1052 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DLG2	Q15700	870 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HABP4	Q5JVS0	413 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TRNP1	Q6NT89	227 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	UBE2Q1	Q7Z7E8	422 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF554	Q86TJ5	538 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MON1A	Q86VX9	555 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SPNS2	Q8IVW8	549 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DSEL	Q8IZU8	1212 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PLD6	Q8N2A8	252 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC2A14	Q8TDB8	520 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RXFP2	Q8WXD0	754 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NXPE3	Q969Y0	559 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SERPINB11	Q96P15	392 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	UNK	Q9C0B0	810 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SDCBP2	Q9H190	292 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	EPB41L1	Q9H4G0	881 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DHX35	Q9H5Z1	703 aa	Known RBP	5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZFP14	Q9HCL3	533 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SORCS3	Q9UPU3	1222 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	YIPF1	Q9Y548	306 aa		5.73	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TRIOBP	Q9H2D6	2365 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FAM159B	A6NKW6	160 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GRXCR1	A8MXD5	290 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	AP1G1	O43747	822 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RNASEH2A	O75792	299 aa	Known RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PRKCG	P05129	697 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CHRNG	P07510	517 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	HDC	P19113	662 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	XPA	P23025	273 aa	Predicted RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GABRR2	P28476	465 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MAGEA8	P43361	318 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MCCD1	P59942	119 aa	Predicted RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PRAME	P78395	509 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GBE1	Q04446	702 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TWF1	Q12792	350 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ADGRE1	Q14246	886 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PRSS55	Q6UWB4	352 aa	Predicted RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZNF534	Q76KX8	674 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	LPCAT2	Q7L5N7	544 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MYO1H	Q8N1T3	1032 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CPA6	Q8N4T0	437 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SNX31	Q8N9S9	440 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TSPAN14	Q8NG11	270 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SPPL3	Q8TCT6	385 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	EME1	Q96AY2	570 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ZFR	Q96KR1	1074 aa	Known RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KLHL32	Q96NJ5	620 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	RNF157	Q96PX1	679 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CAB39L	Q9H9S4	337 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CNGB3	Q9NQW8	809 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ABCC13	Q9NSE7	274 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DNMT3L	Q9UJW3	386 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	EFR3B	Q9Y2G0	817 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MFHAS1	Q9Y4C4	1052 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CEP290	O15078	2479 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CCDC78	A2IDD5	438 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	C7orf72	A4D263	438 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PLOD2	O00469	737 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PTGES	O14684	152 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	OAZ2	O95190	189 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NFATC1	O95644	943 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CYP11A1	P05108	521 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	CPA3	P15088	417 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ARSA	P15289	507 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	KCNA5	P22460	613 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	MPST	P25325	297 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PIK3R1	P27986	724 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	DPP6	P42658	865 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	VASP	P50552	380 aa	Predicted RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	TKTL1	P51854	596 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	NAA20	P61599	178 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GPR158	Q5T848	1215 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	FAM219B	Q5XKK7	198 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	ARHGAP17	Q68EM7	881 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	SLC9A4	Q6AI14	798 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	GET4	Q7L5D6	327 aa	Predicted RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PCDH20	Q8N6Y1	951 aa	Known RBP	5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	UBR7	Q8N806	425 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	PCDH19	Q8TAB3	1148 aa		5.72	□□□□□ -1.49
RAPGEF4-215	ENST00000540783	OVCA2	Q8WZ82	227 aa		5.72	□□□□□ -1.49

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