RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 CNGA4Q8IV77 575 aa17.32■□□□□ 0.36
CACNA2D4-211ENST00000540728 ATPAF2Q8N5M1 289 aa17.32■□□□□ 0.36
CACNA2D4-211ENST00000540728 BMFQ96LC9 184 aa17.32■□□□□ 0.36
CACNA2D4-211ENST00000540728 ETNK2Q9NVF9 386 aa17.32■□□□□ 0.36
CACNA2D4-211ENST00000540728 COL5A1P20908 1838 aaPredicted RBP17.32■□□□□ 0.36
CACNA2D4-211ENST00000540728 ZZEF1O43149 2961 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 ANKRD11Q6UB99 2663 aaPredicted RBP17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 TSPAN11A1L157 253 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 SPINT1O43278 529 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 PROSCO94903 275 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 DKK1O94907 266 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 KRT7P08729 469 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 C1SP09871 688 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 TMEM253P0C7T8 217 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 CDK4P11802 303 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 GJC1P36383 396 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 HSPA9P38646 679 aaKnown RBP17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 RGRP47804 291 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 ADKP55263 362 aaKnown RBP17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 AP1S1P61966 158 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 POLR2LP62875 67 aaKnown RBP17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 ASTE1Q2TB18 679 aaPredicted RBP17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 TMEM52BQ4KMG9 183 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 ZFYVE27Q5T4F4 411 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 DHRS13Q6UX07 377 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 CCNI2Q6ZMN8 369 aaPredicted RBP17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 LRRC49Q8IUZ0 686 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 MAP7D3Q8IWC1 876 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 GALNT15Q8N3T1 639 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 KCTD6Q8NC69 237 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 PSKH2Q96QS6 385 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 KLF6Q99612 283 aaPredicted RBP17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 ANP32EQ9BTT0 268 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 WRAP53Q9BUR4 548 aaKnown RBP17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 PACSIN1Q9BY11 444 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 PCDH12Q9NPG4 1184 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 DNAJC28Q9NX36 388 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 PCDHGA1Q9Y5H4 931 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 TDRD6O60522 2096 aaKnown RBP17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 PTPRBP23467 1997 aa17.31■□□□□ 0.36
CACNA2D4-211ENST00000540728 CFAP47Q6ZTR5 3102 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 SPTY2D1-AS1A0A0U1RR47 76 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 NEMP2A6NFY4 417 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 AKR1B15C9JRZ8 316 aaPredicted RBP17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 H3BM21 787 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 BUB1BO60566 1050 aaPredicted RBP17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 ALPPL2P10696 532 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 ITIH2P19823 946 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 DGKAP23743 735 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 THOP1P52888 689 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 HNRNPKP61978 463 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 SLC10A7Q0GE19 358 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 DNAJC3Q13217 504 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 PDE1CQ14123 709 aaPredicted RBP17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 PTK2BQ14289 1009 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 PDK2Q15119 407 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 KANSL1Q7Z3B3 1105 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 MARCH9Q86YJ5 346 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 TP53INP2Q8IXH6 220 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 SLC22A18ASQ8N1D0 253 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 TSC1Q92574 1164 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 CENPTQ96BT3 561 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 CHP1Q99653 195 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 TRIM5Q9C035 493 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 NHEJ1Q9H9Q4 299 aaPredicted RBP17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 ATP8A1Q9Y2Q0 1164 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 WDFY3Q8IZQ1 3526 aa17.3■□□□□ 0.36
CACNA2D4-211ENST00000540728 FAM149AA5PLN7 773 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 SRRM3A6NNA2 597 aaPredicted RBP17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 TOR1BO14657 336 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 RIOK3O14730 519 aaKnown RBP17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 RFPL3O75679 317 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 PIAS2O75928 621 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 MAN1A1P33908 653 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 YPEL5P62699 121 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 ZNF211Q13398 564 aaPredicted RBP17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 FZD2Q14332 565 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 MARC1Q5VT66 337 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 TMPRSS7Q7RTY8 843 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 PARGQ86W56 976 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 SLC25A45Q8N413 288 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 FAM71BQ8TC56 605 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 GPR27Q9NS67 375 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 ARID1BQ8NFD5 2236 aaPredicted RBP17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 ANKRD36A6QL64 1941 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 ZFHX4Q86UP3 3567 aa17.29■□□□□ 0.36
CACNA2D4-211ENST00000540728 FREM2Q5SZK8 3169 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 A0A1W2PQ67 120 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 TMEM110-MUSTN1A8MSY1 372 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 LZTS3O60299 673 aaPredicted RBP17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 MAFKO60675 156 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 CSF2P04141 144 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 CKMT2P17540 419 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 IL4RP24394 825 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 NFKBIAP25963 317 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 PFN3P60673 137 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 DAB2P98082 770 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 MMRN1Q13201 1228 aa17.28■□□□□ 0.36
CACNA2D4-211ENST00000540728 DPYSL3Q14195 570 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms