RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 NEMP2A6NFY4 417 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 DFFAO00273 331 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 H6PDO95479 791 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 F2P00734 622 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 PAMP19021 973 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 CDH2P19022 906 aaPredicted RBP12.39□□□□□ -0.43
NPC1-202ENST00000540608 ADRA1AP35348 466 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 FAM83EQ2M2I3 478 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 AGKQ53H12 422 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 C9orf131Q5VYM1 1079 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 IQSEC1Q6DN90 963 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 ARHGAP36Q6ZRI8 547 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 CTU1Q7Z7A3 348 aaKnown RBP12.39□□□□□ -0.43
NPC1-202ENST00000540608 SMG8Q8ND04 991 aaKnown RBP12.39□□□□□ -0.43
NPC1-202ENST00000540608 ZC3H15Q8WU90 426 aaKnown RBP12.39□□□□□ -0.43
NPC1-202ENST00000540608 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 IL12RB2Q99665 862 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 TMEM30AQ9NV96 361 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 CACNG4Q9UBN1 327 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 IPO11Q9UI26 975 aaKnown RBP12.39□□□□□ -0.43
NPC1-202ENST00000540608 FBXO5Q9UKT4 447 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 AK5Q9Y6K8 562 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 MYBPHLA2RUH7 354 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 PRORSD1PA6NEY8 169 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 HHLA1C9JL84 531 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 SNRPB2P08579 225 aaKnown RBP12.39□□□□□ -0.43
NPC1-202ENST00000540608 ZNF23P17027 643 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 SLC5A2P31639 672 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 C1QTNF8P60827 252 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 USP46P62068 366 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 PFKPQ01813 784 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 TBC1D25Q3MII6 688 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 TECRLQ5HYJ1 363 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 HERC6Q8IVU3 1022 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 BRI3BPQ8WY22 251 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 TRPV6Q9H1D0 765 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 ZNF408Q9H9D4 720 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 ENTPD7Q9NQZ7 604 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 CHST12Q9NRB3 414 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 TMEM181Q9P2C4 612 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 FIS1Q9Y3D6 152 aa12.39□□□□□ -0.43
NPC1-202ENST00000540608 CCL15-CCL14A0A0B4J2E2 113 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 TREHO43280 583 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 GPC4O75487 556 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 TRMUO75648 421 aaKnown RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 IPO13O94829 963 aaKnown RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 CSPG5O95196 566 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 CPB1P15086 417 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 PCSK6P29122 969 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 RANBP1P43487 201 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 LHX1P48742 406 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 GEMP55040 296 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 HPCAP84074 193 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 GALNT1Q10472 559 aaPredicted RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 CSHL1Q14406 222 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 CYTH1Q15438 398 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 CCL15Q16663 113 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 AGAP9Q5VTM2 703 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 BTBD8Q5XKL5 378 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 ZNF470Q6ECI4 717 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 KIAA0930Q6ICG6 404 aaPredicted RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 FAM45BPQ6NSW5 357 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 RWDD4Q6NW29 188 aaKnown RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 KLC3Q6P597 504 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 CUZD1Q86UP6 607 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 TRIML2Q8N7C3 387 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 FAM45AQ8TCE6 357 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 SENP8Q96LD8 212 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 PPP1R2P1Q96PQ5 205 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 PPP1R10Q96QC0 940 aaKnown RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 CCT7Q99832 543 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 TNFRSF12AQ9NP84 129 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 CCDC167Q9P0B6 97 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 A0A1B0GTW7 788 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 A8MT66 165 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 H3BNH8 94 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 PTGESO14684 152 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 MATN3O15232 486 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 HNRNPRO43390 633 aaKnown RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 CDK4P11802 303 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 KCNA5P22460 613 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 ALDH3B2P48448 385 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 SAMD4BQ5PRF9 694 aaKnown RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 IRAK1BP1Q5VVH5 260 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 NEPROQ6NW34 567 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 C8orf82Q6P1X6 216 aaPredicted RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 HACD2Q6Y1H2 254 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 KIAA0408Q6ZU52 694 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 PTAR1Q7Z6K3 402 aaPredicted RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 ARHGAP12Q8IWW6 846 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 NUP93Q8N1F7 819 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 ATPAF2Q8N5M1 289 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 RNF34Q969K3 372 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 ZNF419Q96HQ0 510 aaPredicted RBP12.38□□□□□ -0.43
NPC1-202ENST00000540608 SLC29A1Q99808 456 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 EFHD1Q9BUP0 239 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 SLC25A23Q9BV35 468 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 CROTQ9UKG9 612 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 SNX13Q9Y5W8 968 aa12.38□□□□□ -0.43
NPC1-202ENST00000540608 PTCH2Q9Y6C5 1203 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms