RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 RINT1Q6NUQ1 792 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 METTL7BQ6UX53 244 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 KCTD20Q7Z5Y7 419 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 SLCO6A1Q86UG4 719 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 ADGRF2Q8IZF7 708 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 OR5H6Q8NGV6 325 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CHAC2Q8WUX2 184 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 PPWD1Q96BP3 646 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 UQCC2Q9BRT2 126 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CFHR5Q9BXR6 569 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 DDX28Q9NUL7 540 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 GABBR1Q9UBS5 961 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 XPO7Q9UIA9 1087 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 ATPIF1Q9UII2 106 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CNOT6Q9ULM6 557 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 MCM3APO60318 1980 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CNTNAP2Q9UHC6 1331 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 TMEM150BA6NC51 233 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 C9IYK1 514 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 MEN1O00255 615 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 RAD51BO15315 384 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 USP12O75317 370 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 DLGAP3O95886 979 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 C1QAP02745 245 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 GSNP06396 782 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 COL6A1P12109 1028 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CFL1P23528 166 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 NLRP11P59045 1033 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 POU6F2P78424 691 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 PRKCZQ05513 592 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 TAF5Q15542 800 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 NFIL3Q16649 462 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 SLC9B1Q4ZJI4 515 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 C2CD6Q53TS8 623 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 ATAD3CQ5T2N8 411 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 PLA2G4FQ68DD2 849 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 DCUN1D2Q6PH85 259 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CRTC3Q6UUV7 619 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CBR4Q8N4T8 237 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 FBXL6Q8N531 539 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 OR2T3Q8NH03 318 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 GRPEL2Q8TAA5 225 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CD99L2Q8TCZ2 262 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CYGBQ8WWM9 190 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 METTL2AQ96IZ6 378 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 MAGED4Q96JG8 741 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 KREMEN1Q96MU8 473 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 PCDHAC1Q9H158 963 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 ADAMTS10Q9H324 1103 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 C20orf96Q9NUD7 363 aaPredicted RBP9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 CFL2Q9Y281 166 aa9.55□□□□□ -0.88
CTNNA1-243ENST00000540387 PLXNB2O15031 1838 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 A0A1W2PQ72 361 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 C12orf71A8MTZ7 269 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 TRIM38O00635 465 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SHOXO15266 292 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SNX2O60749 519 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 TIPRLO75663 272 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 VAPBO95292 243 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 ATG7O95352 703 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SERPINE1P05121 402 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 PSAPP07602 524 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SPNP16150 400 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 CD40LGP29965 261 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SLC7A1P30825 629 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 GRIA1P42261 906 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 PLA2G16P53816 162 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 PSMC5P62195 406 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 LGSNQ5TDP6 509 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 ZNF773Q6PK81 442 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 MFSD7Q6UXD7 560 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 LACC1Q8IV20 430 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 GALNT12Q8IXK2 581 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SCML4Q8N228 414 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 LEMD2Q8NC56 503 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 RDM1Q8NG50 284 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 NKD2Q969F2 451 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 ASB9Q96DX5 294 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 NRBF2Q96F24 287 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 ZFYVE19Q96K21 471 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 APBA2Q99767 749 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 ACO2Q99798 780 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 COG4Q9H9E3 785 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 PLSCR3Q9NRY6 295 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 KCND2Q9NZV8 630 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 IFT80Q9P2H3 777 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SLCO3A1Q9UIG8 710 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 VANGL2Q9ULK5 521 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 PCDHGC3Q9UN70 934 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 KIAA1217Q5T5P2 1943 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 A0A0G2JMP0 313 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 HDAC3O15379 428 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SYNCRIPO60506 623 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 NDUFS2O75306 463 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 DAB1O75553 588 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 NTRK1P04629 796 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SUPT20HL2P0C7V6 817 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 RALBP11234 206 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms