RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 THAP11Q96EK4 314 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 COX4I2Q96KJ9 171 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 ZMAT2Q96NC0 199 aaKnown RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 UNKQ9C0B0 810 aaKnown RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 BRD8Q9H0E9 1235 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 RPF2Q9H7B2 306 aaKnown RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 CXorf21Q9HAI6 301 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 CCM2LQ9NUG4 571 aaPredicted RBP11.31□□□□□ -0.6
CPT1A-206ENST00000540367 TUBGCP4Q9UGJ1 667 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 STAP1Q9ULZ2 295 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 AKT3Q9Y243 479 aa11.31□□□□□ -0.6
CPT1A-206ENST00000540367 SBF1O95248 1867 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 H3BMQ9 156 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 GIPC1O14908 333 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 CLASP2O75122 1294 aaKnown RBP11.3□□□□□ -0.6
CPT1A-206ENST00000540367 DCKP27707 260 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 RABGGTBP53611 331 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 PHEXP78562 749 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 MPP1Q00013 466 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 MERTKQ12866 999 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 SEMA3BQ13214 749 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 NME3Q13232 169 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 PPP1R3AQ16821 1122 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 Q3C1V9 767 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 MAP7D1Q3KQU3 841 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 ZNF484Q5JVG2 852 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 C1QTNF12Q5T7M4 302 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 LAYNQ6UX15 382 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 DENND6AQ8IWF6 608 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 NPWQ8N729 165 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 ZNF513Q8N8E2 541 aaPredicted RBP11.3□□□□□ -0.6
CPT1A-206ENST00000540367 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 WNT8BQ93098 351 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 ZUFSPQ96AP4 578 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 SGF29Q96ES7 293 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 COG8Q96MW5 612 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 VAT1Q99536 393 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 PIGVQ9NUD9 493 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 SLC38A7Q9NVC3 462 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 MRPL42Q9Y6G3 142 aaKnown RBP11.3□□□□□ -0.6
CPT1A-206ENST00000540367 SHROOM3Q8TF72 1996 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 A0A087X1B8 175 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 NEMP2A6NFY4 417 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 TMX2-CTNND1H3BSU7 103 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 GPC4O75487 556 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 INSRRP14616 1297 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 MAGEA10P43363 369 aaPredicted RBP11.3□□□□□ -0.6
CPT1A-206ENST00000540367 TPI1P60174 286 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 SLC36A3Q495N2 470 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 INTS6LQ5JSJ4 861 aaKnown RBP11.3□□□□□ -0.6
CPT1A-206ENST00000540367 TBCELQ5QJ74 424 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 LINC00523Q86TU6 105 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 PIGZQ86VD9 579 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 TBC1D15Q8TC07 691 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 HEXDCQ8WVB3 486 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 ROPN1LQ96C74 230 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 RHOBTB2Q9BYZ6 727 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 PAIP1Q9H074 479 aaKnown RBP11.3□□□□□ -0.6
CPT1A-206ENST00000540367 EML4Q9HC35 981 aaKnown RBP11.3□□□□□ -0.6
CPT1A-206ENST00000540367 TNFRSF12AQ9NP84 129 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 ERAP1Q9NZ08 941 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 UBP1Q9NZI7 540 aa11.3□□□□□ -0.6
CPT1A-206ENST00000540367 MKI67P46013 3256 aaKnown RBP11.3□□□□□ -0.6
CPT1A-206ENST00000540367 AQP12BA6NM10 295 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 INHBBP09529 407 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 TFPTP0C1Z6 253 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 ZNF286BP0CG31 522 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 ZNF12P17014 697 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 LMO2P25791 158 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 ADRA1BP35368 520 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 ATP4BP51164 291 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 CTBP1Q13363 440 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 PMS2P3Q13401 168 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 PRPSAP1Q14558 356 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 PDCD4Q53EL6 469 aaKnown RBP11.29□□□□□ -0.6
CPT1A-206ENST00000540367 FASTKD5Q7L8L6 764 aaKnown RBP11.29□□□□□ -0.6
CPT1A-206ENST00000540367 ANKRD23Q86SG2 305 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 CUZD1Q86UP6 607 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 ZNF354CQ86Y25 554 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 AQP12AQ8IXF9 295 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 CPNE9Q8IYJ1 553 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.29□□□□□ -0.6
CPT1A-206ENST00000540367 SNX31Q8N9S9 440 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 BEST2Q8NFU1 509 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 OR9I1Q8NGQ6 314 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 NTAN1Q96AB6 310 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 ELMO2Q96JJ3 720 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 TEKT5Q96M29 485 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 SLC9A7Q96T83 725 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 MPHOSPH6Q99547 160 aaKnown RBP11.29□□□□□ -0.6
CPT1A-206ENST00000540367 SLC39A3Q9BRY0 314 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 TRIM15Q9C019 465 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 PLEKHA5Q9HAU0 1116 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 AGPAT4Q9NRZ5 378 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.29□□□□□ -0.6
CPT1A-206ENST00000540367 GMPR2Q9P2T1 348 aaKnown RBP11.29□□□□□ -0.6
CPT1A-206ENST00000540367 ITGB1BP2Q9UKP3 347 aa11.29□□□□□ -0.6
CPT1A-206ENST00000540367 MTF2Q9Y483 593 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms