RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 ARAP2Q8WZ64 1704 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 MARF1Q9Y4F3 1742 aaKnown RBP13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ZNF487B1APH4 448 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 LTFP02788 710 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 CCR1P32246 355 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ARPP19P56211 112 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 DDR2Q16832 855 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ARMCX4Q5H9R4 360 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 PIGZQ86VD9 579 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ZFP28Q8NHY6 868 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 B3GNT5Q9BYG0 378 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 CEP44Q9C0F1 390 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ZNF358Q9NW07 568 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 DERAQ9Y315 318 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ANKRD36CQ5JPF3 1778 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 BCORQ6W2J9 1755 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 CLDN25C9JDP6 229 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 KCNH1O95259 989 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 MAPK1P28482 360 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 PFKFB4Q16877 469 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 CRTC3Q6UUV7 619 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 SPATA19Q7Z5L4 167 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ALDH16A1Q8IZ83 802 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ATP6V0D2Q8N8Y2 350 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 FBXO27Q8NI29 283 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ZNF420Q8TAQ5 688 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-203ENST00000540357 HPS1Q92902 700 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 MFSD3Q96ES6 412 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 MRPL45Q9BRJ2 306 aaKnown RBP13.1□□□□□ -0.31
DNMT1-203ENST00000540357 RMI1Q9H9A7 625 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ZNF408Q9H9D4 720 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 GBA2Q9HCG7 927 aaPredicted RBP13.1□□□□□ -0.31
DNMT1-203ENST00000540357 DSEQ9UL01 958 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 TBC1D30Q9Y2I9 924 aa13.1□□□□□ -0.31
DNMT1-203ENST00000540357 ATP6AP2A0A1C7CYW4 349 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 ATP6AP2O75787 350 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 FARP2O94887 1054 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-203ENST00000540357 HOXC6P09630 235 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 ODC1P11926 461 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 GRIA1P42261 906 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 ZRANB3Q5FWF4 1079 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 CELF3Q5SZQ8 465 aaKnown RBP13.09□□□□□ -0.31
DNMT1-203ENST00000540357 PTRHD1Q6GMV3 140 aaKnown RBP13.09□□□□□ -0.31
DNMT1-203ENST00000540357 BPIFB6Q8NFQ5 453 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 FANCEQ9HB96 536 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 SLC17A6Q9P2U8 582 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 PCDHGB4Q9UN71 923 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 A0A1B0GVG6 124 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 BTBD19C9JJ37 291 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 AMHP03971 560 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 ICAM3P32942 547 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 IRF9Q00978 393 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 SLCO6A1Q86UG4 719 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 EDEM1Q92611 657 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 PHF12Q96QT6 1004 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 ULBP1Q9BZM6 244 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 DPY30Q9C005 99 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 PCDHAC1Q9H158 963 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 GPBP1L1Q9HC44 474 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-203ENST00000540357 EXOSC4Q9NPD3 245 aaKnown RBP13.09□□□□□ -0.31
DNMT1-203ENST00000540357 FAM32AQ9Y421 112 aaKnown RBP13.09□□□□□ -0.31
DNMT1-203ENST00000540357 DOCK2Q92608 1830 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 TRIM43BA6NCK2 446 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 MLYCDO95822 493 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 CACNB2Q08289 660 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-203ENST00000540357 PLCL1Q15111 1095 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 UGT2A3Q6UWM9 527 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 CCDC185Q8N715 623 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 ATG16L2Q8NAA4 619 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 AGAP2Q99490 1192 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 BBS2Q9BXC9 721 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 SPATC1LQ9H0A9 340 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 USP29Q9HBJ7 922 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 ACSS2Q9NR19 701 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 RREB1Q92766 1687 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 TMEM247A6NEH6 219 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 RECQL5O94762 991 aaPredicted RBP13.09□□□□□ -0.31
DNMT1-203ENST00000540357 ZNF682O95780 498 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 CLDN10P78369 228 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 MGAT5BQ3V5L5 792 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 HGH1Q9BTY7 390 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 IMPAD1Q9NX62 359 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 TMEM9Q9P0T7 183 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 FAM8A1Q9UBU6 413 aa13.09□□□□□ -0.31
DNMT1-203ENST00000540357 ANXA6P08133 673 aa13.08□□□□□ -0.31
DNMT1-203ENST00000540357 MYBPC3Q14896 1274 aa13.08□□□□□ -0.31
DNMT1-203ENST00000540357 MOGQ16653 247 aa13.08□□□□□ -0.31
DNMT1-203ENST00000540357 LRRC49Q8IUZ0 686 aa13.08□□□□□ -0.31
DNMT1-203ENST00000540357 TAGAPQ8N103 731 aa13.08□□□□□ -0.31
DNMT1-203ENST00000540357 C12orf43Q96C57 262 aaKnown RBP13.08□□□□□ -0.31
DNMT1-203ENST00000540357 BCO2Q9BYV7 579 aa13.08□□□□□ -0.31
DNMT1-203ENST00000540357 ATXN3LQ9H3M9 355 aa13.08□□□□□ -0.31
DNMT1-203ENST00000540357 RIBC2Q9H4K1 309 aa13.08□□□□□ -0.31
DNMT1-203ENST00000540357 SEMA4BQ9NPR2 832 aaPredicted RBP13.08□□□□□ -0.31
DNMT1-203ENST00000540357 WWOXQ9NZC7 414 aa13.08□□□□□ -0.31
DNMT1-203ENST00000540357 TRIM17Q9Y577 477 aa13.08□□□□□ -0.31
DNMT1-203ENST00000540357 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.32
DNMT1-203ENST00000540357 MAST2Q6P0Q8 1798 aa13.08□□□□□ -0.32
DNMT1-203ENST00000540357 BMP10O95393 424 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms