RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 KCTD6Q8NC69 237 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 BHLHE22Q8NFJ8 381 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 FNDC8Q8TC99 324 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PROX1Q92786 737 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 DCUN1D1Q96GG9 259 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 SLC25A23Q9BV35 468 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TDRD1Q9BXT4 1180 aaKnown RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 MTMR12Q9C0I1 747 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 RSAD1Q9HA92 442 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 SLCO1B3Q9NPD5 702 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ARL8BQ9NVJ2 186 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CHORDC1Q9UHD1 332 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF222Q9UK12 451 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PNMA8BQ9ULN7 279 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CCL15-CCL14A0A0B4J2E2 113 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 HEATR9A2RTY3 570 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CPNE3O75131 537 aaKnown RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PEX11AO75192 247 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ITGAVP06756 1048 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 STAG3L1P0CL83 205 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PEPDP12955 493 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TYK2P29597 1187 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ASPAP45381 313 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ACADSBP45954 432 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 YAP1P46937 504 aaKnown RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 SOX10P56693 466 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CHRNB3Q05901 458 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 GRSF1Q12849 480 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PDK2Q15119 407 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CCL15Q16663 113 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TFDP3Q5H9I0 405 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 MZT2AQ6P582 158 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 KLHL35Q6PF15 583 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ECHDC2Q86YB7 292 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 FBXO16Q8IX29 292 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 FBXW8Q8N3Y1 598 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 DNAAF3Q8N9W5 541 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TTC29Q8NA56 475 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 SH2D3AQ9BRG2 576 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TCEAL7Q9BRU2 100 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PCDH9Q9HC56 1237 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 SACM1LQ9NTJ5 587 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 GRHL1Q9NZI5 618 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 AKT3Q9Y243 479 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ZBTB42B2RXF5 422 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 E5RI56 91 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 DPYSL4O14531 572 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TIMM44O43615 452 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 RPL35P42766 123 aaKnown RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CD97P48960 835 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 EIF3EP60228 445 aaKnown RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PTPN11Q06124 597 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PRKAA1Q13131 559 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CBLBQ13191 982 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ATP13A5Q4VNC0 1218 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PDPK2PQ6A1A2 396 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 NOTUMQ6P988 496 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PAGE2Q7Z2X7 111 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PIGWQ7Z7B1 504 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ZBTB33Q86T24 672 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 SLC26A11Q86WA9 606 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 FIG4Q92562 907 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 SH3KBP1Q96B97 665 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PTCD3Q96EY7 689 aaKnown RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 UGT2B28Q9BY64 529 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ROGDIQ9GZN7 287 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 UBP1Q9NZI7 540 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 STOX2Q9P2F5 926 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 UBQLN1Q9UMX0 589 aaKnown RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 C12orf71A8MTZ7 269 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TOR1BO14657 336 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ZMPSTE24O75844 475 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 IFNA14P01570 189 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 INSRRP14616 1297 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CPT1AP50416 773 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 INHBEP58166 350 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF45Q02386 682 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 DNASE1L3Q13609 305 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 SIX1Q15475 284 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ZSWIM7Q19AV6 140 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TDRPQ86YL5 185 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 NDUFAF2Q8N183 169 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 SPERTQ8NA61 448 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 OR5B17Q8NGF7 314 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 CLIP3Q96DZ5 547 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 VPS35Q96QK1 796 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 PI4K2AQ9BTU6 479 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 HTATIP2Q9BUP3 242 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 RIBC2Q9H4K1 309 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF556Q9HAH1 456 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 GMIPQ9P107 970 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTPRD-214ENST00000540109 DNAJC16Q9Y2G8 782 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 RAD54BQ9Y620 910 aa6.1□□□□□ -1.43
PTPRD-214ENST00000540109 TEX51A0A1B0GUA7 166 aa6.09□□□□□ -1.43
PTPRD-214ENST00000540109 SH3PXD2BA1X283 911 aa6.09□□□□□ -1.43
PTPRD-214ENST00000540109 A6NHS1 94 aa6.09□□□□□ -1.43
PTPRD-214ENST00000540109 TMEM114B3SHH9 223 aa6.09□□□□□ -1.43
PTPRD-214ENST00000540109 F8W810 466 aa6.09□□□□□ -1.43
PTPRD-214ENST00000540109 PDHXO00330 501 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms