RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 CEP85LQ5SZL2 805 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 AGBL2Q5U5Z8 902 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 ANKRD22Q5VYY1 191 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 KIAA0930Q6ICG6 404 aaPredicted RBP11.88□□□□□ -0.51
VTN-202ENST00000539746 LINGO4Q6UY18 593 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 GDPD4Q6W3E5 623 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 GLT6D1Q7Z4J2 308 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 GALNT7Q86SF2 657 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 PRPF39Q86UA1 669 aaKnown RBP11.88□□□□□ -0.51
VTN-202ENST00000539746 TMEM135Q86UB9 458 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 LCA5Q86VQ0 697 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 GSPT2Q8IYD1 628 aaKnown RBP11.88□□□□□ -0.51
VTN-202ENST00000539746 UBALD2Q8IYN6 164 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 APCDD1Q8J025 514 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 KRT222Q8N1A0 295 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 STK40Q8N2I9 435 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 NAT16Q8N8M0 369 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 MYLIPQ8WY64 445 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 MYEOVQ96EZ4 313 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 ASIC4Q96FT7 647 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 CABS1Q96KC9 395 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 TCF12Q99081 682 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 CPNE1Q99829 537 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 HINFPQ9BQA5 517 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 IER2Q9BTL4 223 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 SUV39H2Q9H5I1 410 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 CNOT10Q9H9A5 744 aaKnown RBP11.88□□□□□ -0.51
VTN-202ENST00000539746 VPS18Q9P253 973 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 LHX3Q9UBR4 397 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 IL36AQ9UHA7 158 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 PDE4DIPQ5VU43 2346 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 SCAMP3O14828 347 aaKnown RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 ALDH1A2O94788 518 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 PGLSO95336 258 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 MT-CYBP00156 380 aaPredicted RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 LPOP22079 712 aaPredicted RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 PRKCHP24723 683 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 MGAT1P26572 445 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 SPRP35270 261 aaPredicted RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 CCNHP51946 323 aaPredicted RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 KPNA2P52292 529 aaKnown RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 MAXP61244 160 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 DLX2Q07687 328 aaPredicted RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 SEPT6Q14141 434 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 GRM2Q14416 872 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 CRYMQ14894 314 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 GLIPR1L2Q4G1C9 344 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 HABP4Q5JVS0 413 aaKnown RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 SIRPB2Q5JXA9 342 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 DGKKQ5KSL6 1271 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 EOGTQ5NDL2 527 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 FNBP1LQ5T0N5 605 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 AFTPHQ6ULP2 937 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 CERS6Q6ZMG9 384 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 B4GALNT4Q76KP1 1039 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 TP53INP2Q8IXH6 220 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 TAB3Q8N5C8 712 aaPredicted RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 SPATA22Q8NHS9 363 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 PDCD6IPQ8WUM4 868 aaKnown RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 HEXDCQ8WVB3 486 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 SREK1Q8WXA9 508 aaKnown RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 FGF14Q92915 247 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 CFAP36Q96G28 342 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 SGSM3Q96HU1 749 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 SIGLEC10Q96LC7 697 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 C9orf72Q96LT7 481 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 FAM161BQ96MY7 647 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 TSNARE1Q96NA8 513 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 GPR63Q9BZJ6 419 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 NEUROG2Q9H2A3 272 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 KCNK12Q9HB15 430 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 LRRC4CQ9HCJ2 640 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 ZDHHC4Q9NPG8 344 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 HPS4Q9NQG7 708 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 THAP10Q9P2Z0 257 aaPredicted RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 FCF1Q9Y324 198 aaKnown RBP11.87□□□□□ -0.51
VTN-202ENST00000539746 COMMD10Q9Y6G5 202 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 TRANK1O15050 2925 aa11.87□□□□□ -0.51
VTN-202ENST00000539746 SPECC1L-ADORA2AF8WAN1 911 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 H0Y858 1186 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 PSMD11O00231 422 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 TP73O15350 636 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 STX7O15400 261 aaKnown RBP11.86□□□□□ -0.51
VTN-202ENST00000539746 TTPAP49638 278 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 CSE1LP55060 971 aaKnown RBP11.86□□□□□ -0.51
VTN-202ENST00000539746 FAM193AP78312 1265 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 NIPAL4Q0D2K0 466 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 TRADDQ15628 312 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 SEPT7Q16181 437 aaKnown RBP11.86□□□□□ -0.51
VTN-202ENST00000539746 TTC31Q49AM3 519 aaPredicted RBP11.86□□□□□ -0.51
VTN-202ENST00000539746 ANKRD20A4Q4UJ75 823 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 ZNF805Q5CZA5 627 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 TSTD2Q5T7W7 516 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 GRTP1Q5TC63 336 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 TRIM68Q6AZZ1 485 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 ZNF852Q6ZMS4 543 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 ANKMY2Q8IV38 441 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 ADHFE1Q8IWW8 467 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 CTAGE3PQ8IX95 158 aa11.86□□□□□ -0.51
VTN-202ENST00000539746 CHPFQ8IZ52 775 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms