RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 PRICKLE1Q96MT3 831 aaPredicted RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 SPON2Q9BUD6 331 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 TMEM120AQ9BXJ8 343 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 MUC3BQ9H195 1237 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 MYLK2Q9H1R3 596 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 LRMDAQ9H2I8 198 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 ALG13Q9NP73 1137 aaKnown RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 TMEM216Q9P0N5 145 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 DPP7Q9UHL4 492 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 LNPEPQ9UIQ6 1025 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 EMCNQ9ULC0 261 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 RPL26L1Q9UNX3 145 aaKnown RBP10.25□□□□□ -0.77
SPARC-209ENST00000539687 CHKBQ9Y259 395 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 SH3BP1Q9Y3L3 701 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 SHROOM3Q8TF72 1996 aa10.25□□□□□ -0.77
SPARC-209ENST00000539687 GOLGA8QA0A0J9YX86 632 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 GOLGA8OA6NCC3 632 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 C2orf81A6NN90 581 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 GOLGA8NF8WBI6 632 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 RPP40O75818 363 aaKnown RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 KLHL2O95198 593 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 GLP2RO95838 553 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 FGBP02675 491 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 AHSGP02765 367 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 CYBBP04839 570 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 RBP1P09455 135 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 FGF3P11487 239 aaPredicted RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 NQO1P15559 274 aaKnown RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 CALB2P22676 271 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 SLC1A2P43004 574 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 ABCE1P61221 599 aaKnown RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 RPL26P61254 145 aaKnown RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 NAA20P61599 178 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 NCALDP61601 193 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 AP1S1P61966 158 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 UBE3AQ05086 875 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 SLC20A2Q08357 652 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 RIPK1Q13546 671 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 CDH18Q13634 790 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 MPPE1Q53F39 396 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 FAM182AQ5T1J6 154 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 AGAP9Q5VTM2 703 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 LIPMQ5VYY2 423 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 RFWD3Q6PCD5 774 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 AFTPHQ6ULP2 937 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 ASRGL1Q7L266 308 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 CLNKQ7Z7G1 428 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 CIR1Q86X95 450 aaPredicted RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 ARID3BQ8IVW6 561 aaPredicted RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 MFN1Q8IWA4 741 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 CFAP52Q8N1V2 620 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 ARHGAP24Q8N264 748 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 PGBD5Q8N414 524 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.24□□□□□ -0.77
SPARC-209ENST00000539687 PDCD6IPQ8WUM4 868 aaKnown RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 CLP1Q92989 425 aaKnown RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 ACDQ96AP0 544 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 SKA1Q96BD8 255 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 VWCEQ96DN2 955 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 TMA16Q96EY4 203 aaKnown RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 ELMO2Q96JJ3 720 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 TCF12Q99081 682 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 MRPL57Q9BQC6 102 aaKnown RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 ZBED2Q9BTP6 218 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 C2orf49Q9BVC5 232 aaPredicted RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 MRPL46Q9H2W6 279 aaKnown RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 TASP1Q9H6P5 420 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 SLC40A1Q9NP59 571 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 ARHGEF3Q9NR81 526 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 INTS10Q9NVR2 710 aaKnown RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 DNAJC28Q9NX36 388 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 SLC17A6Q9P2U8 582 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 HEY2Q9UBP5 337 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 DCTN4Q9UJW0 460 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.24□□□□□ -0.77
SPARC-209ENST00000539687 IRAK3Q9Y616 596 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 HTTP42858 3142 aa10.24□□□□□ -0.77
SPARC-209ENST00000539687 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 TRIM43BA6NCK2 446 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 GOLGA8CPA6NN73 597 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 F8W8V4 182 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 LDB2O43679 373 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 TBL1XO60907 577 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 RASSF9O75901 435 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 HSPA4LO95757 839 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 PENKP01210 267 aaPredicted RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 KLKB1P03952 638 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 IRF1P10914 325 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 ALOX15P16050 662 aaPredicted RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 CR2P20023 1033 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 PSMA3P25788 255 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 ARNTP27540 789 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 CHRNA4P43681 627 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 MNAT1P51948 309 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 RPS24P62847 133 aaKnown RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 OVGP1Q12889 678 aa10.23□□□□□ -0.77
SPARC-209ENST00000539687 MSLNQ13421 630 aaPredicted RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 TAF1AQ15573 450 aaPredicted RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 ZRSR2Q15696 482 aaKnown RBP10.23□□□□□ -0.77
SPARC-209ENST00000539687 AARS2Q5JTZ9 985 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms