RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TKTL2Q9H0I9 626 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 GLOD4Q9HC38 313 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SPAG4Q9NPE6 437 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 CRTAC1Q9NQ79 661 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 CROTQ9UKG9 612 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 TCAF1Q9Y4C2 921 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SNX13Q9Y5W8 968 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 SNX10Q9Y5X0 201 aa9.75□□□□□ -0.85
CDH13-204ENST00000539548 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 SMIM35A0A1B0GVV1 85 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 HTRA2O43464 458 aaPredicted RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 NRP2O60462 931 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 BMP10O95393 424 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 MMP3P08254 477 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 USP17L7P0C7H9 530 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 BMP2P12643 396 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 PAMP19021 973 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 ATP4BP51164 291 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 EMP3P54852 163 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 SLC12A2P55011 1212 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 GEMP55040 296 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 FAM83EQ2M2I3 478 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 TECRLQ5HYJ1 363 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 BTBD8Q5XKL5 378 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 KIAA0930Q6ICG6 404 aaPredicted RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 HMBOX1Q6NT76 420 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 KIAA0408Q6ZU52 694 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 GPC2Q8N158 579 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 USP33Q8TEY7 942 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 CELF6Q96J87 481 aaKnown RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 FAM210AQ96ND0 272 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 PPP1R2P1Q96PQ5 205 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 RANBP9Q96S59 729 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 IL12RB2Q99665 862 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 FICDQ9BVA6 458 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 ANKRD60Q9BZ19 345 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 ENTPD7Q9NQZ7 604 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 TREX1Q9NSU2 369 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 ARMC1Q9NVT9 282 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 FBXO5Q9UKT4 447 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 SLC8A2Q9UPR5 921 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 NEMP2A6NFY4 417 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 A8MT66 165 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 MRASO14807 208 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 SRP72O76094 671 aaKnown RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 IPO13O94829 963 aaKnown RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 CSPG5O95196 566 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 MT-CYBP00156 380 aaPredicted RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 RBP1P09455 135 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 HSPA8P11142 646 aaKnown RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 CPB1P15086 417 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 ACADVLP49748 655 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 RABGGTBP53611 331 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 MTX3Q5HYI7 312 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 NHSL2Q5HYW2 709 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 C6orf10Q5SRN2 563 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 AGAP9Q5VTM2 703 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 OLFML2BQ68BL8 750 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 GPRIN1Q7Z2K8 1008 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 CUZD1Q86UP6 607 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 SULF1Q8IWU6 871 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 ANKRD13AQ8IZ07 590 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 MYO1HQ8N1T3 1032 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 ZMIZ2Q8NF64 920 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 IPMKQ8NFU5 416 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 ZUFSPQ96AP4 578 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 TMIGD2Q96BF3 282 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 RMND5BQ96G75 393 aaPredicted RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 BIRC8Q96P09 236 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 UNKQ9C0B0 810 aaKnown RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 CAAP1Q9H8G2 361 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 NOL11Q9H8H0 719 aaKnown RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 CLK4Q9HAZ1 481 aaKnown RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 CCDC167Q9P0B6 97 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 SLC2A6Q9UGQ3 507 aa9.74□□□□□ -0.85
CDH13-204ENST00000539548 CNOT6Q9ULM6 557 aaKnown RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 PIN4Q9Y237 131 aaKnown RBP9.74□□□□□ -0.85
CDH13-204ENST00000539548 A0A0J9YVX5 310 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 TRIM64CA6NLI5 447 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 HHLA1C9JL84 531 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 SNAI1O95863 264 aaPredicted RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 HDCP19113 662 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 KCNA5P22460 613 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 CYP2C18P33260 490 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ADARP55265 1226 aaKnown RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 PRKCQQ04759 706 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 RALGDSQ12967 914 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 CSHL1Q14406 222 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 SLC14A2Q15849 920 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 DUSP28Q4G0W2 176 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ZNF470Q6ECI4 717 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 KRT80Q6KB66 452 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 NEPROQ6NW34 567 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 DHRS4L2Q6PKH6 230 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ARHGAP36Q6ZRI8 547 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ZBTB49Q6ZSB9 765 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 BHLHA9Q7RTU4 235 aa9.73□□□□□ -0.85
CDH13-204ENST00000539548 ZNF467Q7Z7K2 595 aaPredicted RBP9.73□□□□□ -0.85
CDH13-204ENST00000539548 FAM35AQ86V20 835 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms