RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 GIT1Q9Y2X7 761 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 TRPV2Q9Y5S1 764 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 FAM95CA0A1B0GW59 222 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 M0QZ92 97 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 DFFAO00273 331 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 MATN3O15232 486 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 DLX3O60479 287 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 NPHS1O60500 1241 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 RNASEH1O60930 286 aaKnown RBP14.68□□□□□ -0.06
CDCA3-207ENST00000538862 TADA2AO75478 443 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 CA3P07451 260 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 ZCCHC18P0CG32 403 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 STMN1P16949 149 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 PAMP19021 973 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 SAT1P21673 171 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 PEX2P28328 305 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 CD52P31358 61 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 ADRA1AP35348 466 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 NUDT2P50583 147 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 NSUN2Q08J23 767 aaKnown RBP eCLIP14.68□□□□□ -0.06
CDCA3-207ENST00000538862 TRIP10Q15642 601 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 DENND5AQ6IQ26 1287 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 RWDD4Q6NW29 188 aaKnown RBP14.68□□□□□ -0.06
CDCA3-207ENST00000538862 SPRED2Q7Z698 418 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 SDCCAG8Q86SQ7 713 aaPredicted RBP14.68□□□□□ -0.06
CDCA3-207ENST00000538862 SLC41A1Q8IVJ1 513 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 ARHGAP12Q8IWW6 846 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 GALNT15Q8N3T1 639 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 ZNF513Q8N8E2 541 aaPredicted RBP14.68□□□□□ -0.06
CDCA3-207ENST00000538862 SPDYE1Q8NFV5 336 aaPredicted RBP14.68□□□□□ -0.06
CDCA3-207ENST00000538862 USP33Q8TEY7 942 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 ZFAND2BQ8WV99 257 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 MYLIPQ8WY64 445 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 CDX2Q99626 313 aaPredicted RBP14.68□□□□□ -0.06
CDCA3-207ENST00000538862 DDX50Q9BQ39 737 aaKnown RBP14.68□□□□□ -0.06
CDCA3-207ENST00000538862 NUF2Q9BZD4 464 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 CATSPERBQ9H7T0 1116 aa14.68□□□□□ -0.06
CDCA3-207ENST00000538862 A0A087X1B8 175 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.67□□□□□ -0.06
CDCA3-207ENST00000538862 NEMP1O14524 444 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 MAFKO60675 156 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 VAPBO95292 243 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 ODC1P11926 461 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 VCLP18206 1134 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 AVPR1AP37288 418 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 GLRBP48167 497 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 KPNA2P52292 529 aaKnown RBP14.67□□□□□ -0.06
CDCA3-207ENST00000538862 DNAJB13P59910 316 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 PPP2R5DQ14738 602 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 UPP1Q16831 310 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 LRRC36Q1X8D7 754 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 TIGD5Q53EQ6 642 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 OGFRL1Q5TC84 451 aaPredicted RBP14.67□□□□□ -0.06
CDCA3-207ENST00000538862 ZFP1Q6P2D0 407 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 BNC2Q6ZN30 1099 aaPredicted RBP14.67□□□□□ -0.06
CDCA3-207ENST00000538862 PGAM4Q8N0Y7 254 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 EFCAB3Q8N7B9 438 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 HIPK4Q8NE63 616 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 SPATA22Q8NHS9 363 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 PHOSPHO2Q8TCD6 241 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 MRPL57Q9BQC6 102 aaKnown RBP14.67□□□□□ -0.06
CDCA3-207ENST00000538862 RTP3Q9BQQ7 232 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 ZBED2Q9BTP6 218 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 CERS4Q9HA82 394 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 SLC28A3Q9HAS3 691 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 DMAP1Q9NPF5 467 aaPredicted RBP14.67□□□□□ -0.06
CDCA3-207ENST00000538862 MRGBPQ9NV56 204 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 XPR1Q9UBH6 696 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 ST3GAL5Q9UNP4 418 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 TCAF1Q9Y4C2 921 aa14.67□□□□□ -0.06
CDCA3-207ENST00000538862 LCHNA4D1U4 455 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 ARL5CA6NH57 179 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 TRPC5OSA6NMA1 111 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 IRAK2O43187 625 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 TLL1O43897 1013 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 COQ9O75208 318 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 MT-CYBP00156 380 aaPredicted RBP14.66□□□□□ -0.06
CDCA3-207ENST00000538862 CYP11A1P05108 521 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 ARNTP27540 789 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 AQP4P55087 323 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 GRM2Q14416 872 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 RFTN1Q14699 578 aaPredicted RBP14.66□□□□□ -0.06
CDCA3-207ENST00000538862 POU6F1Q14863 301 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 PIGGQ5H8A4 983 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 PPP2R2DQ66LE6 453 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 KIAA0930Q6ICG6 404 aaPredicted RBP14.66□□□□□ -0.06
CDCA3-207ENST00000538862 TIGD7Q6NT04 549 aaPredicted RBP14.66□□□□□ -0.06
CDCA3-207ENST00000538862 ESRP1Q6NXG1 681 aaKnown RBP14.66□□□□□ -0.06
CDCA3-207ENST00000538862 ARHGAP36Q6ZRI8 547 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 METTL23Q86XA0 190 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 DENND6AQ8IWF6 608 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 ST13P4Q8IZP2 240 aaPredicted RBP14.66□□□□□ -0.06
CDCA3-207ENST00000538862 PQLC1Q8N2U9 271 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 C2CD4AQ8NCU7 369 aaPredicted RBP14.66□□□□□ -0.06
CDCA3-207ENST00000538862 IPMKQ8NFU5 416 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 NXNL1Q96CM4 212 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 MAELQ96JY0 434 aaKnown RBP14.66□□□□□ -0.06
CDCA3-207ENST00000538862 CDRT15Q96T59 188 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 RHOBTB2Q9BYZ6 727 aa14.66□□□□□ -0.06
CDCA3-207ENST00000538862 PRKD2Q9BZL6 878 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms