RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 ARRDC3Q96B67 414 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 ECHDC3Q96DC8 303 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 HHIPQ96QV1 700 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 EPB41L5Q9HCM4 733 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 POLMQ9NP87 494 aaPredicted RBP23.7■■□□□ 1.38
TMEM260-202ENST00000538838 GRHL1Q9NZI5 618 aa23.7■■□□□ 1.38
TMEM260-202ENST00000538838 BHMG1C9JSJ3 638 aaPredicted RBP23.69■■□□□ 1.38
TMEM260-202ENST00000538838 MID1O15344 667 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 PSMD3O43242 534 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 PGLSO95336 258 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 PRLP01236 227 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 CHRNA4P43681 627 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 ITGA8P53708 1063 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 ZNF805Q5CZA5 627 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 CFAP58Q5T655 872 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 ARMC12Q5T9G4 340 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 PARS2Q7L3T8 475 aaKnown RBP23.69■■□□□ 1.38
TMEM260-202ENST00000538838 LPCAT1Q8NF37 534 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 HMGB4Q8WW32 186 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 MRGPRX1Q96LB2 322 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 EPC1Q9H2F5 836 aa23.69■■□□□ 1.38
TMEM260-202ENST00000538838 LOC285095A0A1B0GVY8 99 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 PLK4O00444 970 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 TP73O15350 636 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 SUN1O94901 812 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 ADH1BP00325 375 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 CPP00450 1065 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 GABRG2P18507 467 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 SLC8A1P32418 973 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 GRIA1P42261 906 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 MAGEA9P43362 315 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 PCGF5Q86SE9 256 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 SLC25A41Q8N5S1 370 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 SEC14L1Q92503 715 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 PRCCQ92733 491 aaPredicted RBP23.68■■□□□ 1.38
TMEM260-202ENST00000538838 IER2Q9BTL4 223 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 EPHX3Q9H6B9 360 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 PIH1D1Q9NWS0 290 aaKnown RBP23.68■■□□□ 1.38
TMEM260-202ENST00000538838 WHRNQ9P202 907 aa23.68■■□□□ 1.38
TMEM260-202ENST00000538838 GOLGA8MH3BSY2 632 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 ATXN1LP0C7T5 689 aaKnown RBP23.67■■□□□ 1.38
TMEM260-202ENST00000538838 ITGB7P26010 798 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 CLCN5P51795 746 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 LRRC73Q5JTD7 316 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 SIRPB2Q5JXA9 342 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 FAM46CQ5VWP2 391 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 NAPEPLDQ6IQ20 393 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 ANO7Q6IWH7 933 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 HIBCHQ6NVY1 386 aaPredicted RBP23.67■■□□□ 1.38
TMEM260-202ENST00000538838 KIAA1324Q6UXG2 1013 aaKnown RBP23.67■■□□□ 1.38
TMEM260-202ENST00000538838 AADATQ8N5Z0 425 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 TSTD1Q8NFU3 115 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 PBXIP1Q96AQ6 731 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 PPP1R16AQ96I34 528 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 SMIM14Q96QK8 99 aa23.67■■□□□ 1.38
TMEM260-202ENST00000538838 ARIH1Q9Y4X5 557 aaPredicted RBP23.67■■□□□ 1.38
TMEM260-202ENST00000538838 TSPAN11A1L157 253 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 C16orf96A6NNT2 1141 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 TNFRSF10AO00220 468 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 NDST3O95803 873 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 TNNT3P45378 269 aaPredicted RBP23.66■■□□□ 1.38
TMEM260-202ENST00000538838 CALCOCO2Q13137 446 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 MORF4L2Q15014 288 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 SLC1A5Q15758 541 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 BRAT1Q6PJG6 821 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 RANBP10Q6VN20 620 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 PPP1R21Q6ZMI0 780 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 ZNF534Q76KX8 674 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 HOOK3Q86VS8 718 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 OR52K1Q8NGK4 314 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 PIH1D2Q8WWB5 315 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 SIPA1Q96FS4 1042 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 DYRK4Q9NR20 520 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 DKK3Q9UBP4 350 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 ANAPC5Q9UJX4 755 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 SHOC2Q9UQ13 582 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 DNTTP04053 509 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 PRKCGP05129 697 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 ITIH2P19823 946 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 C5AR1P21730 350 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 DRD3P35462 400 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 EPHB1P54762 984 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 DRG2P55039 364 aaKnown RBP23.66■■□□□ 1.38
TMEM260-202ENST00000538838 CDK16Q00536 496 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 DENND5AQ6IQ26 1287 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 BBOF1Q8ND07 529 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 UBXN4Q92575 508 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 RMDN1Q96DB5 314 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 COL25A1Q9BXS0 654 aaPredicted RBP23.66■■□□□ 1.38
TMEM260-202ENST00000538838 ADGRE3Q9BY15 652 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 PABPC3Q9H361 631 aaKnown RBP23.66■■□□□ 1.38
TMEM260-202ENST00000538838 ANKZF1Q9H8Y5 726 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 BCCIPQ9P287 314 aaKnown RBP eCLIP23.66■■□□□ 1.38
TMEM260-202ENST00000538838 SERGEFQ9UGK8 458 aa23.66■■□□□ 1.38
TMEM260-202ENST00000538838 EPOP01588 193 aa23.65■■□□□ 1.38
TMEM260-202ENST00000538838 HLA-DPA1P20036 260 aa23.65■■□□□ 1.38
TMEM260-202ENST00000538838 CNTN1Q12860 1018 aa23.65■■□□□ 1.38
TMEM260-202ENST00000538838 MTM1Q13496 603 aa23.65■■□□□ 1.38
TMEM260-202ENST00000538838 PTPRRQ15256 657 aa23.65■■□□□ 1.38
TMEM260-202ENST00000538838 QPCTQ16769 361 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms